RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 ZCWPW2A0A1B0GU75 182 aa13.16□□□□□ -0.3
SGCA-201ENST00000262018 LOC285095A0A1B0GVY8 99 aa13.16□□□□□ -0.3
SGCA-201ENST00000262018 TMEM120BA0PK00 339 aa13.16□□□□□ -0.3
SGCA-201ENST00000262018 PRPF4O43172 522 aaKnown RBP eCLIP13.16□□□□□ -0.3
SGCA-201ENST00000262018 MT-CO1P00395 513 aa13.16□□□□□ -0.3
SGCA-201ENST00000262018 TPH1P17752 444 aa13.16□□□□□ -0.3
SGCA-201ENST00000262018 COL8A1P27658 744 aa13.16□□□□□ -0.3
SGCA-201ENST00000262018 SERPINB9P50453 376 aa13.16□□□□□ -0.3
SGCA-201ENST00000262018 SLC18A1P54219 525 aa13.16□□□□□ -0.3
SGCA-201ENST00000262018 RPS21P63220 83 aaKnown RBP13.16□□□□□ -0.3
SGCA-201ENST00000262018 ZSCAN26Q16670 478 aa13.16□□□□□ -0.3
SGCA-201ENST00000262018 INO80DQ53TQ3 878 aaPredicted RBP13.16□□□□□ -0.3
SGCA-201ENST00000262018 ARL10Q8N8L6 244 aa13.16□□□□□ -0.3
SGCA-201ENST00000262018 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.16□□□□□ -0.3
SGCA-201ENST00000262018 CDKL2Q92772 493 aa13.16□□□□□ -0.3
SGCA-201ENST00000262018 TMEM159Q96B96 161 aa13.16□□□□□ -0.3
SGCA-201ENST00000262018 ZNF669Q96BR6 464 aaPredicted RBP13.16□□□□□ -0.3
SGCA-201ENST00000262018 CERS2Q96G23 380 aa13.16□□□□□ -0.3
SGCA-201ENST00000262018 CATSPER2Q96P56 530 aa13.16□□□□□ -0.3
SGCA-201ENST00000262018 CMKLR1Q99788 373 aa13.16□□□□□ -0.3
SGCA-201ENST00000262018 CINPQ9BW66 212 aaPredicted RBP13.16□□□□□ -0.3
SGCA-201ENST00000262018 SLC13A1Q9BZW2 595 aa13.16□□□□□ -0.3
SGCA-201ENST00000262018 CLPBQ9H078 707 aa13.16□□□□□ -0.3
SGCA-201ENST00000262018 TRPM6Q9BX84 2022 aa13.16□□□□□ -0.3
SGCA-201ENST00000262018 A0A1W2PPM1 405 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.15□□□□□ -0.3
SGCA-201ENST00000262018 STMND1H3BQB6 276 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 K7ERQ8 282 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 SMAD6O43541 496 aaKnown RBP13.15□□□□□ -0.3
SGCA-201ENST00000262018 CD160O95971 181 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 SNRPAP09012 282 aaKnown RBP13.15□□□□□ -0.3
SGCA-201ENST00000262018 LIFP15018 202 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 GNLYP22749 145 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 CES1P23141 567 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 ELAVL4P26378 380 aaKnown RBP13.15□□□□□ -0.3
SGCA-201ENST00000262018 LSP1P33241 339 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 THOP1P52888 689 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 KLRB1Q12918 225 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 CYTH1Q15438 398 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 LACTB2Q53H82 288 aaPredicted RBP13.15□□□□□ -0.3
SGCA-201ENST00000262018 LGSNQ5TDP6 509 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 TMEM164Q5U3C3 297 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 TTC19Q6DKK2 380 aaPredicted RBP13.15□□□□□ -0.3
SGCA-201ENST00000262018 KIAA1161Q6NSJ0 714 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 C22orf39Q6P5X5 142 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 CES3Q6UWW8 571 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 UNC5BQ8IZJ1 945 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 IL22RA1Q8N6P7 574 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 PCDH20Q8N6Y1 951 aaKnown RBP13.15□□□□□ -0.3
SGCA-201ENST00000262018 Q8N9G6 341 aaPredicted RBP13.15□□□□□ -0.3
SGCA-201ENST00000262018 TMIEQ8NEW7 156 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 NKD1Q969G9 470 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 ISG20Q96AZ6 181 aaKnown RBP13.15□□□□□ -0.3
SGCA-201ENST00000262018 ABHD17AQ96GS6 310 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 FEM1CQ96JP0 617 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 RANBP9Q96S59 729 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 SMC6Q96SB8 1091 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 INTS9Q9NV88 658 aaKnown RBP13.15□□□□□ -0.3
SGCA-201ENST00000262018 TCAF1Q9Y4C2 921 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 ACTL7AQ9Y615 435 aa13.15□□□□□ -0.3
SGCA-201ENST00000262018 RP1L1Q8IWN7 2480 aaPredicted RBP13.15□□□□□ -0.31
SGCA-201ENST00000262018 PRR19A6NJB7 356 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 ZNF891A8MT65 544 aaPredicted RBP13.14□□□□□ -0.31
SGCA-201ENST00000262018 UGT1A9O60656 530 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 VPS4BO75351 444 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 TMCC1O94876 653 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 EPOP01588 193 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 PRNPP04156 253 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 CELA2BP08218 269 aaPredicted RBP13.14□□□□□ -0.31
SGCA-201ENST00000262018 RNF224P0DH78 156 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 ADRA1DP25100 572 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 CNTFP26441 200 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 ZFP36L1Q07352 338 aaKnown RBP13.14□□□□□ -0.31
SGCA-201ENST00000262018 SGCGQ13326 291 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 MSLNQ13421 630 aaPredicted RBP13.14□□□□□ -0.31
SGCA-201ENST00000262018 MPP2Q14168 576 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 TCEA2Q15560 299 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 SLC1A5Q15758 541 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 PCSK7Q16549 785 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 ARSIQ5FYB1 569 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 PHF19Q5T6S3 580 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 CHST14Q8NCH0 376 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 PPHLN1Q8NEY8 458 aaKnown RBP13.14□□□□□ -0.31
SGCA-201ENST00000262018 GRIN3AQ8TCU5 1115 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 SCG3Q8WXD2 468 aaKnown RBP13.14□□□□□ -0.31
SGCA-201ENST00000262018 ALKBH8Q96BT7 664 aaKnown RBP13.14□□□□□ -0.31
SGCA-201ENST00000262018 MTBPQ96DY7 904 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 MFSD3Q96ES6 412 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 KLF6Q99612 283 aaPredicted RBP13.14□□□□□ -0.31
SGCA-201ENST00000262018 HDAC8Q9BY41 377 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 CCDC134Q9H6E4 229 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 UGT1A7Q9HAW7 530 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 UGT1A10Q9HAW8 530 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 UGT1A8Q9HAW9 530 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 KCNK9Q9NPC2 374 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 CHRAC1Q9NRG0 131 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 PNMA8BQ9ULN7 279 aaPredicted RBP13.14□□□□□ -0.31
SGCA-201ENST00000262018 VPS4AQ9UN37 437 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 FCF1Q9Y324 198 aaKnown RBP13.14□□□□□ -0.31
SGCA-201ENST00000262018 POLQO75417 2590 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms