RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 VPREB1P12018 145 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 CDH1P12830 882 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 POLR2CP19387 275 aaPredicted RBP4.27□□□□□ -1.73
CCDC54-201ENST00000261058 KRT20P35900 424 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 LMAN1P49257 510 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 CLK1P49759 484 aaKnown RBP4.27□□□□□ -1.73
CCDC54-201ENST00000261058 LIG4P49917 911 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 FUT6P51993 359 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 KYNUQ16719 465 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 ZNF585BQ52M93 769 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 TMEM35AQ53FP2 167 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 IGSF11Q5DX21 431 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 TEX38Q6PEX7 206 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 TMCO3Q6UWJ1 677 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 UNQ6126/PRO20091Q6UXV3 157 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 RAD9BQ6WBX8 426 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 SFR1Q86XK3 245 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 NAGSQ8N159 534 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 CHCHD4Q8N4Q1 142 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 POMGNT2Q8NAT1 580 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 POGLUT1Q8NBL1 392 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 KCTD6Q8NC69 237 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 APPL2Q8NEU8 664 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 LMO3Q8TAP4 145 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 RSPH1Q8WYR4 309 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 PHF21AQ96BD5 680 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 ERLEC1Q96DZ1 483 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 IGSF21Q96ID5 467 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 SH3GLB2Q9NR46 395 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 MALT1Q9UDY8 824 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 RALYQ9UKM9 306 aaKnown RBP4.27□□□□□ -1.73
CCDC54-201ENST00000261058 SAA2-SAA4A0A096LPE2 208 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 A6NL46 340 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 SMTNL1A8MU46 457 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 HEPACAM2A8MVW5 462 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 ACOT8O14734 319 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 ZBTB43O43298 467 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 SNRNP70P08621 437 aaKnown RBP4.26□□□□□ -1.73
CCDC54-201ENST00000261058 ZNF23P17027 643 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 ARCN1P48444 511 aaKnown RBP4.26□□□□□ -1.73
CCDC54-201ENST00000261058 KRT83P78385 493 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 PLIN5Q00G26 463 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 COASYQ13057 564 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 SNTB1Q13884 538 aaKnown RBP4.26□□□□□ -1.73
CCDC54-201ENST00000261058 SLC39A14Q15043 492 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 CBWD6Q4V339 395 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 CBWD3Q5JTY5 395 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 SPECC1Q5M775 1068 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 PLEKHM3Q6ZWE6 761 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 PLPPR4Q7Z2D5 763 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 MUC20Q8N307 709 aaPredicted RBP4.26□□□□□ -1.73
CCDC54-201ENST00000261058 TDRD5Q8NAT2 981 aaKnown RBP4.26□□□□□ -1.73
CCDC54-201ENST00000261058 KCNH5Q8NCM2 988 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 PAPD5Q8NDF8 572 aaKnown RBP4.26□□□□□ -1.73
CCDC54-201ENST00000261058 SMPDL3BQ92485 455 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 CDHR1Q96JP9 859 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 PKP4Q99569 1192 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 GPR88Q9GZN0 384 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 LRMDAQ9H2I8 198 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 SLA2Q9H6Q3 261 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 MBNL1Q9NR56 388 aaKnown RBP4.26□□□□□ -1.73
CCDC54-201ENST00000261058 NFKBIL1Q9UBC1 381 aaPredicted RBP4.26□□□□□ -1.73
CCDC54-201ENST00000261058 PPIEQ9UNP9 301 aaKnown RBP4.26□□□□□ -1.73
CCDC54-201ENST00000261058 YIPF1Q9Y548 306 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 TRPV2Q9Y5S1 764 aa4.26□□□□□ -1.73
CCDC54-201ENST00000261058 A0A1W2PS18 150 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 FEZF1A0PJY2 475 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 ASPDHA6ND91 283 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 PRAC2D3DTV9 90 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 PRAMEF11O60813 436 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 GCNT3O95395 438 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 ABCB1P08183 1280 aaPredicted RBP4.25□□□□□ -1.73
CCDC54-201ENST00000261058 AHRP35869 848 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 GNL1P36915 607 aaPredicted RBP4.25□□□□□ -1.73
CCDC54-201ENST00000261058 SNRPEP62304 92 aaKnown RBP4.25□□□□□ -1.73
CCDC54-201ENST00000261058 RPL24P83731 157 aaKnown RBP4.25□□□□□ -1.73
CCDC54-201ENST00000261058 EEF1A2Q05639 463 aaKnown RBP4.25□□□□□ -1.73
CCDC54-201ENST00000261058 PNRC1Q12796 327 aaPredicted RBP4.25□□□□□ -1.73
CCDC54-201ENST00000261058 TROAPQ12815 778 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 AIMP1Q12904 312 aaKnown RBP4.25□□□□□ -1.73
CCDC54-201ENST00000261058 IL11RAQ14626 422 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 NR1D2Q14995 579 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 RASA2Q15283 850 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 ASIC2Q16515 512 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 CRY2Q49AN0 593 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 C9orf152Q5JTZ5 239 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 OR7E24Q6IFN5 339 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 PLXDC2Q6UX71 529 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 NDUFAF2Q8N183 169 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 RBM15BQ8NDT2 890 aaKnown RBP4.25□□□□□ -1.73
CCDC54-201ENST00000261058 MCUQ8NE86 351 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 WDR20Q8TBZ3 569 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 PPP4R1Q8TF05 950 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 PGAP3Q96FM1 320 aaPredicted RBP4.25□□□□□ -1.73
CCDC54-201ENST00000261058 C16orf70Q9BSU1 422 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 MOV10L1Q9BXT6 1211 aaKnown RBP4.25□□□□□ -1.73
CCDC54-201ENST00000261058 EVA1AQ9H8M9 152 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 FKRPQ9H9S5 495 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 ZNF556Q9HAH1 456 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 LRRC4Q9HBW1 653 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms