RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 GTF2E2P29084 291 aaKnown RBP9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 CYP2C18P33260 490 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 FAUP35544 74 aaKnown RBP9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 VGLL4Q14135 290 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 MYBPC3Q14896 1274 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 ZNF615Q8N8J6 731 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 SLC37A3Q8NCC5 494 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 ZNF431Q8TF32 576 aaPredicted RBP9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 TMBIM1Q969X1 311 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 LPIN3Q9BQK8 851 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 MRIQ9BWK5 157 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 ELAC1Q9H777 363 aaKnown RBP9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 ARPC2O15144 300 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 ELK4P28324 431 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 SEMA3AQ14563 771 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 RAB39AQ14964 217 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 TLR1Q15399 786 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 TPGS1Q6ZTW0 290 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 CLEC4CQ8WTT0 213 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 S100A13Q99584 98 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 C1QTNF1Q9BXJ1 281 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 ST6GALNAC4Q9H4F1 302 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 ANKRA2Q9H9E1 313 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 DNAJC11Q9NVH1 559 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 DISP2A7MBM2 1401 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 GNB5O14775 395 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 TPST2O60704 377 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 PDHA2P29803 388 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 GNG2P59768 71 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 ATP6V0D1P61421 351 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 CLCQ05315 142 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 PCDH1Q08174 1060 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 PLPPR4Q7Z2D5 763 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 RNF180Q86T96 592 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 IQCF2Q8IXL9 164 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 SLCO2A1Q92959 643 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 LENG9Q96B70 501 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 FEM1CQ96JP0 617 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 LRTM1Q9HBL6 345 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 GRIP1Q9Y3R0 1128 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 MYH15Q9Y2K3 1946 aa9.64□□□□□ -0.87
CTDSPL2-201ENST00000260327 LRRC14BA6NHZ5 514 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 GPR25O00155 361 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 MC4RP32245 332 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 CDK18Q07002 472 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 PIGFQ07326 219 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 FAM35AQ86V20 835 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 CFAP52Q8N1V2 620 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 SLC35B2Q8TB61 432 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 PLEKHO2Q8TD55 490 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 KCNC2Q96PR1 638 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 ADAM2Q99965 735 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 TMEM246Q9BRR3 403 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 GBA3Q9H227 469 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 ABHD16BQ9H3Z7 469 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 AKAP7Q9P0M2 348 aaPredicted RBP9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 DNAJB9Q9UBS3 223 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 NEMP2A6NFY4 417 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 TRBC1P01850 177 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 NUDT6P53370 316 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 RPA4Q13156 261 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 FAM98AQ8NCA5 519 aaKnown RBP9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 ZFP28Q8NHY6 868 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 CERKQ8TCT0 537 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 TEFMQ96QE5 360 aaKnown RBP9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 SOX17Q9H6I2 414 aaPredicted RBP9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 MAP4K5Q9Y4K4 846 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 TLL2Q9Y6L7 1015 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 CPSF4LA6NMK7 179 aaKnown RBP9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 FADS2P1A8MWK0 482 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 RPS3P23396 243 aaKnown RBP eCLIP9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 NDUFV1P49821 464 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 ABRQ12979 859 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 PLEKHG6Q3KR16 790 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 FKBP1CQ5VVH2 108 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 ADAMTSL2Q86TH1 951 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 CIR1Q86X95 450 aaPredicted RBP9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 DENND1CQ8IV53 801 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 ELL3Q9HB65 397 aaPredicted RBP9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 SLC27A5Q9Y2P5 690 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 MYH7P12883 1935 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 PLOD2O00469 737 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 CDC40O60508 579 aaKnown RBP eCLIP9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 DDNO94850 711 aaPredicted RBP9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 IFNA16P05015 189 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 COL6A2P12110 1019 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 PRKAR2AP13861 404 aaKnown RBP9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 GNPDA1P46926 289 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 RPL26P61254 145 aaKnown RBP9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 BIKQ13323 160 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 PGBD3Q8N328 593 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 OR5K1Q8NHB7 308 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 FAM129BQ96TA1 746 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 RACGAP1Q9H0H5 632 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 AGO3Q9H9G7 860 aaKnown RBP9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 DTLQ9NZJ0 730 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 HMGXB4Q9UGU5 601 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 ZNF232Q9UNY5 417 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 A0A075B6Q4 140 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 GSAPA4D1B5 854 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms