RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 SMOXQ9NWM0 555 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 GNPTGQ9UJJ9 305 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 PLXND1Q9Y4D7 1925 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 GVINP1Q7Z2Y8 2422 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 RGSL1A5PLK6 1076 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 MEI4A8MW99 385 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 TMEM114B3SHH9 223 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 E5RI56 91 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 SEMA4FO95754 770 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 ELFN1P0C7U0 828 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 ATP5F1P24539 256 aaPredicted RBP17.21■□□□□ 0.34
SRSF1-201ENST00000258962 ACSL1P33121 698 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 LIG3P49916 1009 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 CCDC6Q16204 474 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 WDR45BQ5MNZ6 344 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 PTRHD1Q6GMV3 140 aaKnown RBP17.21■□□□□ 0.34
SRSF1-201ENST00000258962 FBXL19Q6PCT2 694 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 MACC1Q6ZN28 852 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 CRLF3Q8IUI8 442 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 SYT12Q8IV01 421 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 DTX3LQ8TDB6 740 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 SREK1Q8WXA9 508 aaKnown RBP17.21■□□□□ 0.34
SRSF1-201ENST00000258962 COQ10AQ96MF6 247 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 WRAP53Q9BUR4 548 aaKnown RBP17.21■□□□□ 0.34
SRSF1-201ENST00000258962 RIOK2Q9BVS4 552 aaKnown RBP17.21■□□□□ 0.34
SRSF1-201ENST00000258962 SPATA16Q9BXB7 569 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 PCED1AQ9H1Q7 454 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 ABCG8Q9H221 673 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 TFB2MQ9H5Q4 396 aaKnown RBP17.21■□□□□ 0.34
SRSF1-201ENST00000258962 SARS2Q9NP81 518 aaKnown RBP17.21■□□□□ 0.34
SRSF1-201ENST00000258962 ACSS2Q9NR19 701 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 DYRK4Q9NR20 520 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 RAD18Q9NS91 495 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 DCTN4Q9UJW0 460 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 DHRS7Q9Y394 339 aa17.21■□□□□ 0.34
SRSF1-201ENST00000258962 MYO15AQ9UKN7 3530 aa17.2■□□□□ 0.34
SRSF1-201ENST00000258962 RALGAPA1Q6GYQ0 2036 aa17.2■□□□□ 0.34
SRSF1-201ENST00000258962 A8MT66 165 aa17.2■□□□□ 0.34
SRSF1-201ENST00000258962 FADS2P1A8MWK0 482 aa17.2■□□□□ 0.34
SRSF1-201ENST00000258962 PSMD11O00231 422 aa17.2■□□□□ 0.34
SRSF1-201ENST00000258962 ZNF806P0C7X5 589 aa17.2■□□□□ 0.34
SRSF1-201ENST00000258962 ITPKAP23677 461 aa17.2■□□□□ 0.34
SRSF1-201ENST00000258962 SKIV2L2P42285 1042 aaKnown RBP17.2■□□□□ 0.34
SRSF1-201ENST00000258962 DNAJB13P59910 316 aa17.2■□□□□ 0.34
SRSF1-201ENST00000258962 CCDC15Q0P6D6 951 aa17.2■□□□□ 0.34
SRSF1-201ENST00000258962 ELP6Q0PNE2 266 aa17.2■□□□□ 0.34
SRSF1-201ENST00000258962 GPRC6AQ5T6X5 926 aa17.2■□□□□ 0.34
SRSF1-201ENST00000258962 ERN2Q76MJ5 926 aaKnown RBP17.2■□□□□ 0.34
SRSF1-201ENST00000258962 CPNE9Q8IYJ1 553 aa17.2■□□□□ 0.34
SRSF1-201ENST00000258962 NKAPQ8N5F7 415 aaKnown RBP17.2■□□□□ 0.34
SRSF1-201ENST00000258962 TRAM1L1Q8N609 369 aa17.2■□□□□ 0.34
SRSF1-201ENST00000258962 GBP7Q8N8V2 638 aaPredicted RBP17.2■□□□□ 0.34
SRSF1-201ENST00000258962 RHEBL1Q8TAI7 183 aa17.2■□□□□ 0.34
SRSF1-201ENST00000258962 ATOH8Q96SQ7 321 aa17.2■□□□□ 0.34
SRSF1-201ENST00000258962 COPS8Q99627 209 aa17.2■□□□□ 0.34
SRSF1-201ENST00000258962 HDAC8Q9BY41 377 aa17.2■□□□□ 0.34
SRSF1-201ENST00000258962 ABCF3Q9NUQ8 709 aa17.2■□□□□ 0.34
SRSF1-201ENST00000258962 MARCOQ9UEW3 520 aaPredicted RBP17.2■□□□□ 0.34
SRSF1-201ENST00000258962 FZD4Q9ULV1 537 aa17.2■□□□□ 0.34
SRSF1-201ENST00000258962 DNAJC16Q9Y2G8 782 aa17.2■□□□□ 0.34
SRSF1-201ENST00000258962 USH1CQ9Y6N9 552 aa17.2■□□□□ 0.34
SRSF1-201ENST00000258962 LRRC72A6NJI9 287 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 CCT8L1PA6NM43 557 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 METTL12A8MUP2 240 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 ITGB6P18564 788 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 NSG1P42857 185 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 CCR10P46092 362 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 NAGLUP54802 743 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 ATP6V0D1P61421 351 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 CNTN1Q12860 1018 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 ACOX1Q15067 660 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 TMEM52BQ4KMG9 183 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 UGT3A1Q6NUS8 523 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.19■□□□□ 0.34
SRSF1-201ENST00000258962 NRSN1Q8IZ57 195 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 AADATQ8N5Z0 425 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 EEF1AKMT1Q8WVE0 214 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 CCT6BQ92526 530 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 KIAA1191Q96A73 305 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 LINGO1Q96FE5 620 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 DTD2Q96FN9 168 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 DRC3Q9H069 523 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 CDH19Q9H159 772 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 KDM4CQ9H3R0 1056 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 CYP4F12Q9HCS2 524 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 PARD6AQ9NPB6 346 aa17.19■□□□□ 0.34
SRSF1-201ENST00000258962 A0A0G2JND7 137 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 NPEPPSL1A6NEC2 478 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 F8W8V4 182 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 CDC7O00311 574 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 KHNYNO15037 678 aaKnown RBP17.18■□□□□ 0.34
SRSF1-201ENST00000258962 IPO13O94829 963 aaKnown RBP17.18■□□□□ 0.34
SRSF1-201ENST00000258962 CHRNGP07510 517 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 KITP10721 976 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 TGM1P22735 817 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 HOXD12P35452 270 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 DRD3P35462 400 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 NFKB2Q00653 900 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 RCN2Q14257 317 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 KHDC1Q4VXA5 237 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms