RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 MICALCLQ6ZW33 695 aa18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 PRSS42Q7Z5A4 293 aa18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 RASGRP3Q8IV61 690 aa18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 GALNT6Q8NCL4 622 aa18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 OR13C4Q8NGS5 318 aa18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 STARD8Q92502 1023 aa18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 ALG3Q92685 438 aa18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 INSM2Q96T92 566 aaPredicted RBP18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 FERMT1Q9BQL6 677 aa18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 RBSNQ9H1K0 784 aa18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 SLC25A18Q9H1K4 315 aa18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 TRIT1Q9H3H1 467 aaKnown RBP18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 FAM96AQ9H5X1 160 aa18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 RPS6KL1Q9Y6S9 549 aa18.61■□□□□ 0.57
TM6SF1-201ENST00000258909 CCL22O00626 93 aa18.6■□□□□ 0.57
TM6SF1-201ENST00000258909 SRP72O76094 671 aaKnown RBP18.6■□□□□ 0.57
TM6SF1-201ENST00000258909 KIAA0754O94854 1291 aa18.6■□□□□ 0.57
TM6SF1-201ENST00000258909 IPO7O95373 1038 aaKnown RBP18.6■□□□□ 0.57
TM6SF1-201ENST00000258909 OAS2P29728 719 aaKnown RBP18.6■□□□□ 0.57
TM6SF1-201ENST00000258909 CCR10P46092 362 aa18.6■□□□□ 0.57
TM6SF1-201ENST00000258909 RWDD2BP57060 319 aa18.6■□□□□ 0.57
TM6SF1-201ENST00000258909 CDC20Q12834 499 aa18.6■□□□□ 0.57
TM6SF1-201ENST00000258909 KCNAB2Q13303 367 aa18.6■□□□□ 0.57
TM6SF1-201ENST00000258909 PRPSAP1Q14558 356 aa18.6■□□□□ 0.57
TM6SF1-201ENST00000258909 KCNAB1Q14722 419 aa18.6■□□□□ 0.57
TM6SF1-201ENST00000258909 PLCL1Q15111 1095 aa18.6■□□□□ 0.57
TM6SF1-201ENST00000258909 METRNLQ641Q3 311 aa18.6■□□□□ 0.57
TM6SF1-201ENST00000258909 C6orf15Q6UXA7 325 aaPredicted RBP18.6■□□□□ 0.57
TM6SF1-201ENST00000258909 PTRH1Q86Y79 214 aaKnown RBP18.6■□□□□ 0.57
TM6SF1-201ENST00000258909 TMTC1Q8IUR5 882 aa18.6■□□□□ 0.57
TM6SF1-201ENST00000258909 ESX1Q8N693 406 aa18.6■□□□□ 0.57
TM6SF1-201ENST00000258909 SPDYE1Q8NFV5 336 aaPredicted RBP18.6■□□□□ 0.57
TM6SF1-201ENST00000258909 KLHL6Q8WZ60 621 aa18.6■□□□□ 0.57
TM6SF1-201ENST00000258909 WWP1Q9H0M0 922 aa18.6■□□□□ 0.57
TM6SF1-201ENST00000258909 EPHA6Q9UF33 1036 aa18.6■□□□□ 0.57
TM6SF1-201ENST00000258909 AAR2Q9Y312 384 aaKnown RBP18.6■□□□□ 0.57
TM6SF1-201ENST00000258909 DNMT3AQ9Y6K1 912 aaPredicted RBP18.6■□□□□ 0.57
TM6SF1-201ENST00000258909 IGHV5-51A0A0C4DH38 117 aa18.59■□□□□ 0.57
TM6SF1-201ENST00000258909 CCDC66A2RUB6 948 aa18.59■□□□□ 0.57
TM6SF1-201ENST00000258909 MTHFD1P11586 935 aaKnown RBP18.59■□□□□ 0.57
TM6SF1-201ENST00000258909 IL11RAQ14626 422 aa18.59■□□□□ 0.57
TM6SF1-201ENST00000258909 DEFB109BQ30KR1 87 aa18.59■□□□□ 0.57
TM6SF1-201ENST00000258909 CERS6Q6ZMG9 384 aa18.59■□□□□ 0.57
TM6SF1-201ENST00000258909 LILRA3Q8N6C8 439 aaPredicted RBP18.59■□□□□ 0.57
TM6SF1-201ENST00000258909 MRFAP1L1Q96HT8 127 aa18.59■□□□□ 0.57
TM6SF1-201ENST00000258909 SPATA13Q96N96 652 aa18.59■□□□□ 0.57
TM6SF1-201ENST00000258909 EFHD1Q9BUP0 239 aa18.59■□□□□ 0.57
TM6SF1-201ENST00000258909 LNPEPQ9UIQ6 1025 aa18.59■□□□□ 0.57
TM6SF1-201ENST00000258909 EFR3BQ9Y2G0 817 aa18.59■□□□□ 0.57
TM6SF1-201ENST00000258909 GRID2IPA4D2P6 1211 aa18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 C5orf60A6NFR6 353 aa18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 MGAT4DA6NG13 374 aa18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 SUV39H1O43463 412 aa18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 SPAG6O75602 509 aa18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 STK10O94804 968 aaKnown RBP18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 WISP1O95388 367 aa18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 TIAF1O95411 115 aa18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 POLBP06746 335 aa18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 NELFEP18615 380 aaKnown RBP18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 PTPN7P35236 360 aa18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 DLSTP36957 453 aa18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 XIAPP98170 497 aa18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 KCNC4Q03721 635 aa18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 MSLNQ13421 630 aaPredicted RBP18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 LRRC57Q8N9N7 239 aa18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 STAMBPL1Q96FJ0 436 aa18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 ZNF514Q96K75 400 aaPredicted RBP18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 C12orf66Q96MD2 445 aa18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 CATSPER2Q96P56 530 aa18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 MAP3K3Q99759 626 aa18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 RAB33BQ9H082 229 aa18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 ADNPQ9H2P0 1102 aa18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 CRLS1Q9UJA2 301 aa18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 CROTQ9UKG9 612 aa18.58■□□□□ 0.57
TM6SF1-201ENST00000258909 SGTAO43765 313 aa18.58■□□□□ 0.56
TM6SF1-201ENST00000258909 TJP3O95049 919 aa18.58■□□□□ 0.56
TM6SF1-201ENST00000258909 FGF5P12034 268 aa18.58■□□□□ 0.56
TM6SF1-201ENST00000258909 FOLR1P15328 257 aa18.58■□□□□ 0.56
TM6SF1-201ENST00000258909 TCN2P20062 427 aa18.58■□□□□ 0.56
TM6SF1-201ENST00000258909 MAP7Q14244 749 aa18.58■□□□□ 0.56
TM6SF1-201ENST00000258909 DENND5AQ6IQ26 1287 aa18.58■□□□□ 0.56
TM6SF1-201ENST00000258909 ATG14Q6ZNE5 492 aa18.58■□□□□ 0.56
TM6SF1-201ENST00000258909 OR2L2Q8NH16 312 aa18.58■□□□□ 0.56
TM6SF1-201ENST00000258909 TBL1YQ9BQ87 522 aa18.58■□□□□ 0.56
TM6SF1-201ENST00000258909 CLMPQ9H6B4 373 aa18.58■□□□□ 0.56
TM6SF1-201ENST00000258909 ZNF71Q9NQZ8 489 aaPredicted RBP18.58■□□□□ 0.56
TM6SF1-201ENST00000258909 PACSIN2Q9UNF0 486 aaPredicted RBP18.58■□□□□ 0.56
TM6SF1-201ENST00000258909 UBR5O95071 2799 aaPredicted RBP18.57■□□□□ 0.56
TM6SF1-201ENST00000258909 A0A0U1RQJ8 604 aa18.57■□□□□ 0.56
TM6SF1-201ENST00000258909 BTNL10A8MVZ5 291 aa18.57■□□□□ 0.56
TM6SF1-201ENST00000258909 KATNA1O75449 491 aa18.57■□□□□ 0.56
TM6SF1-201ENST00000258909 CRTAMO95727 393 aa18.57■□□□□ 0.56
TM6SF1-201ENST00000258909 EBLN1P0CF75 366 aa18.57■□□□□ 0.56
TM6SF1-201ENST00000258909 CETN2P41208 172 aa18.57■□□□□ 0.56
TM6SF1-201ENST00000258909 ARCN1P48444 511 aaKnown RBP18.57■□□□□ 0.56
TM6SF1-201ENST00000258909 VAV2P52735 878 aa18.57■□□□□ 0.56
TM6SF1-201ENST00000258909 ZNF140P52738 457 aaPredicted RBP18.57■□□□□ 0.56
TM6SF1-201ENST00000258909 KLHL35Q6PF15 583 aa18.57■□□□□ 0.56
TM6SF1-201ENST00000258909 KIAA1328Q86T90 577 aa18.57■□□□□ 0.56
TM6SF1-201ENST00000258909 PPP1R3BQ86XI6 285 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms