RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 FBXO39Q8N4B4 442 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 ZNF248Q8NDW4 579 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 SLCO2A1Q92959 643 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 CCDC97Q96F63 343 aaPredicted RBP12.52□□□□□ -0.41
VPREB3-201ENST00000248948 SLC46A1Q96NT5 459 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 TTC1Q99614 292 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 NAPGQ99747 312 aaPredicted RBP12.52□□□□□ -0.41
VPREB3-201ENST00000248948 B3GNT4Q9C0J1 378 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 SEMA6CQ9H3T2 930 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 FAM96AQ9H5X1 160 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 SLC40A1Q9NP59 571 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 KCND1Q9NSA2 647 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 TREX1Q9NSU2 369 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 SMARCAL1Q9NZC9 954 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 BFARQ9NZS9 450 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 PDP2Q9P2J9 529 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 ACSL6Q9UKU0 697 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 WDR37Q9Y2I8 494 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 URB1O60287 2271 aaKnown RBP12.51□□□□□ -0.41
VPREB3-201ENST00000248948 FAM208BQ5VWN6 2430 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 TRBV23OR9-2A0A075B6M9 112 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 CCDC78A2IDD5 438 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 OR52A4PA6NMU1 304 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 RRP8O43159 456 aaKnown RBP12.51□□□□□ -0.41
VPREB3-201ENST00000248948 GOT2P00505 430 aaKnown RBP12.51□□□□□ -0.41
VPREB3-201ENST00000248948 FTH1P02794 183 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 ANKRD34CP0C6C1 535 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 JMJD7P0C870 316 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 MLNP12872 115 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 EIF2S3P41091 472 aaKnown RBP12.51□□□□□ -0.41
VPREB3-201ENST00000248948 CAPZBP47756 277 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 VPS41P49754 854 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 CDKN1CP49918 316 aaPredicted RBP12.51□□□□□ -0.41
VPREB3-201ENST00000248948 SESN2P58004 480 aaPredicted RBP12.51□□□□□ -0.41
VPREB3-201ENST00000248948 RPA4Q13156 261 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 GPR18Q14330 331 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 CLCA4Q14CN2 919 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 C16orf72Q14CZ0 275 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 TRIP13Q15645 432 aaPredicted RBP12.51□□□□□ -0.41
VPREB3-201ENST00000248948 ZNF658BQ4V348 819 aaPredicted RBP12.51□□□□□ -0.41
VPREB3-201ENST00000248948 NKAIN2Q5VXU1 208 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 XKR5Q6UX68 686 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 ZNF574Q6ZN55 896 aaPredicted RBP12.51□□□□□ -0.41
VPREB3-201ENST00000248948 TAS2R42Q7RTR8 314 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 MPP5Q8N3R9 675 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 GPR150Q8NGU9 434 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 HDAC10Q969S8 669 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 ZNF778Q96MU6 729 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 CCM2Q9BSQ5 444 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 COG4Q9H9E3 785 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 XAB2Q9HCS7 855 aaKnown RBP12.51□□□□□ -0.41
VPREB3-201ENST00000248948 SLC2A6Q9UGQ3 507 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 CHD6Q8TD26 2715 aa12.51□□□□□ -0.41
VPREB3-201ENST00000248948 PMS2P1A4D2B8 440 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 CTAGE9A4FU28 777 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 OR51F1A6NGY5 319 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 ZNF185O15231 689 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 TMEM63AO94886 807 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 UBXN7O94888 489 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 TNFSF15O95150 251 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 PRSS56P0CW18 603 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 PPARGP37231 505 aaPredicted RBP12.5□□□□□ -0.41
VPREB3-201ENST00000248948 CFHR1Q03591 330 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 RPE65Q16518 533 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 FASTKD1Q53R41 847 aaKnown RBP12.5□□□□□ -0.41
VPREB3-201ENST00000248948 USP53Q70EK8 1073 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 PLXDC1Q8IUK5 500 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 AGBL5Q8NDL9 886 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 MCUQ8NE86 351 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 OR4L1Q8NH43 312 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 ZFPM2Q8WW38 1151 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 CPT1BQ92523 772 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 RMDN2Q96LZ7 410 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 RUNDC3BQ96NL0 473 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 KIFC1Q9BW19 673 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 TBC1D10AQ9BXI6 508 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 RAB33BQ9H082 229 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 WWP1Q9H0M0 922 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 CHRAC1Q9NRG0 131 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 CATSPERZQ9NTU4 200 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 IMP3Q9NV31 184 aaKnown RBP12.5□□□□□ -0.41
VPREB3-201ENST00000248948 SYBUQ9NX95 663 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 PISDQ9UG56 409 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 PCYOX1Q9UHG3 505 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 SOX13Q9UN79 622 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 HEBP2Q9Y5Z4 205 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 SAR1BQ9Y6B6 198 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 SDK2Q58EX2 2172 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 PTPRQQ9UMZ3 2332 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 CFAP47Q6ZTR5 3102 aa12.5□□□□□ -0.41
VPREB3-201ENST00000248948 TCRBV7S3A2A0A539 114 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 LIN7AO14910 233 aaPredicted RBP12.49□□□□□ -0.41
VPREB3-201ENST00000248948 NVLO15381 856 aaKnown RBP12.49□□□□□ -0.41
VPREB3-201ENST00000248948 TOX3O15405 576 aaPredicted RBP12.49□□□□□ -0.41
VPREB3-201ENST00000248948 C9P02748 559 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 OR56A5P0C7T3 313 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 HOXB3P14651 431 aaPredicted RBP12.49□□□□□ -0.41
VPREB3-201ENST00000248948 MGAT1P26572 445 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 CD82P27701 267 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 NDUFS1P28331 727 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms