RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 ZNF431Q8TF32 576 aaPredicted RBP8.13□□□□□ -1.11
APOB-201ENST00000233242 POLR2J2Q9GZM3 115 aaKnown RBP8.13□□□□□ -1.11
APOB-201ENST00000233242 USP29Q9HBJ7 922 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 RNF6Q9Y252 685 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 NID2Q14112 1375 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 WRBO00258 174 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 MEIS2O14770 477 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 GNAZP19086 355 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 CDH13P55290 713 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 BTN3A2P78410 334 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 ZNF433Q8N7K0 673 aaPredicted RBP8.12□□□□□ -1.11
APOB-201ENST00000233242 TRPM4Q8TD43 1214 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 SENP8Q96LD8 212 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 MAPKAP1Q9BPZ7 522 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 MRPL9Q9BYD2 267 aaKnown RBP8.12□□□□□ -1.11
APOB-201ENST00000233242 GLS2Q9UI32 602 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 PCDHGB7Q9Y5F8 929 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 NPEPPSL1A6NEC2 478 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 MAGEB17A8MXT2 336 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 RLN2P04090 185 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 FKBP1AP62942 108 aaKnown RBP8.12□□□□□ -1.11
APOB-201ENST00000233242 CACNG1Q06432 222 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 VMACQ2NL98 169 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 CERCAMQ5T4B2 595 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 CANT1Q8WVQ1 401 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 ELMO3Q96BJ8 720 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 ZBTB45Q96K62 511 aaPredicted RBP8.12□□□□□ -1.11
APOB-201ENST00000233242 GAD1Q99259 594 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 SALL4Q9UJQ4 1053 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 RP1L1Q8IWN7 2480 aaPredicted RBP8.12□□□□□ -1.11
APOB-201ENST00000233242 SLC7A4O43246 635 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 XRCC1P18887 633 aaPredicted RBP8.12□□□□□ -1.11
APOB-201ENST00000233242 USF2Q15853 346 aaPredicted RBP8.12□□□□□ -1.11
APOB-201ENST00000233242 SCIMPQ6UWF3 145 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 OR10A6Q8NH74 314 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 ZUFSPQ96AP4 578 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 SPATA31C1P0DKV0 1188 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 FKBP1CQ5VVH2 108 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 PYHIN1Q6K0P9 492 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 RABL2AQ9UBK7 228 aaPredicted RBP8.12□□□□□ -1.11
APOB-201ENST00000233242 RABL2BQ9UNT1 228 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 HSPB11Q9Y547 144 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 NDST3O95803 873 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 CDH12P55289 794 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 GABARAPL2P60520 117 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 SNX33Q8WV41 574 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 TISP43B9A030 160 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 NME6O75414 186 aaPredicted RBP8.12□□□□□ -1.11
APOB-201ENST00000233242 TSPAN8P19075 237 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 LCN1P31025 176 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 CCR10P46092 362 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 ZNF767PQ75MW2 155 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.12□□□□□ -1.11
APOB-201ENST00000233242 TRAPPC5Q8IUR0 188 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 SLC37A3Q8NCC5 494 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 NEDD4LQ96PU5 975 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 ZNF717Q9BY31 904 aaPredicted RBP8.12□□□□□ -1.11
APOB-201ENST00000233242 DNMT3LQ9UJW3 386 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 VWDEQ8N2E2 1590 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 RECQL4O94761 1208 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 PKMP14618 531 aaKnown RBP8.12□□□□□ -1.11
APOB-201ENST00000233242 C1orf189Q5VU69 101 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 ELMOD2Q8IZ81 293 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 CLK3P49761 638 aaKnown RBP8.12□□□□□ -1.11
APOB-201ENST00000233242 LAPTM5Q13571 262 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 GRB14Q14449 540 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 PPM1JQ5JR12 505 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 KIAA0930Q6ICG6 404 aaPredicted RBP8.12□□□□□ -1.11
APOB-201ENST00000233242 VSIG10LQ86VR7 867 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 ATCAYQ86WG3 371 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 FAIMQ9NVQ4 179 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 C1orf109Q9NX04 203 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 OR10H1Q9Y4A9 318 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 PPRC1Q5VV67 1664 aaKnown RBP8.12□□□□□ -1.11
APOB-201ENST00000233242 ANXA2P2A6NMY6 339 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 ANXA2P07355 339 aaKnown RBP8.12□□□□□ -1.11
APOB-201ENST00000233242 SMYD5Q6GMV2 418 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 OR2T5Q6IEZ7 315 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 ANKRD23Q86SG2 305 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 RNF180Q86T96 592 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 OR2T29Q8NH02 315 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 STYXQ8WUJ0 223 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 AKAP1Q92667 903 aaKnown RBP eCLIP8.12□□□□□ -1.11
APOB-201ENST00000233242 IDI2Q9BXS1 227 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 MRTO4Q9UKD2 239 aaKnown RBP8.12□□□□□ -1.11
APOB-201ENST00000233242 TRPV2Q9Y5S1 764 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 UBIAD1Q9Y5Z9 338 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 LRRC14BA6NHZ5 514 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 PPEF2O14830 753 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 CCNDBP1O95273 360 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 HUNKP57058 714 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 TIFABQ6ZNK6 161 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 KLHL36Q8N4N3 616 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 SLC25A51Q9H1U9 297 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 PCDHGA4Q9Y5G9 962 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 LRCH4O75427 683 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 PTTG1O95997 202 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 FPR1P21462 350 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 RORAP35398 523 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 GTF2H2Q13888 395 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms