RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 STT3AP46977 705 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 FCGRTP55899 365 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 MTPNP58546 118 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 SMARCB1Q12824 385 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 C18orf21Q32NC0 220 aaPredicted RBP16.05■□□□□ 0.16
LTBR-201ENST00000228918 CYP20A1Q6UW02 462 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 GOLGA7Q7Z5G4 137 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 HBEGFQ99075 208 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 CGREF1Q99674 301 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 OSBPL6Q9BZF3 934 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 NTN4Q9HB63 628 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 TMEM161AQ9NX61 479 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 A0A0U1RQS6 177 aa16.04■□□□□ 0.16
LTBR-201ENST00000228918 H0Y858 1186 aa16.04■□□□□ 0.16
LTBR-201ENST00000228918 UPK1AO00322 258 aa16.04■□□□□ 0.16
LTBR-201ENST00000228918 OR7A17O14581 309 aa16.04■□□□□ 0.16
LTBR-201ENST00000228918 PRSS23O95084 383 aa16.04■□□□□ 0.16
LTBR-201ENST00000228918 ARL1P40616 181 aaPredicted RBP16.04■□□□□ 0.16
LTBR-201ENST00000228918 ARF5P84085 180 aa16.04■□□□□ 0.16
LTBR-201ENST00000228918 NR6A1Q15406 480 aa16.04■□□□□ 0.16
LTBR-201ENST00000228918 TMEM214Q6NUQ4 689 aaKnown RBP16.04■□□□□ 0.16
LTBR-201ENST00000228918 FUT10Q6P4F1 479 aa16.04■□□□□ 0.16
LTBR-201ENST00000228918 SBSNQ6UWP8 590 aa16.04■□□□□ 0.16
LTBR-201ENST00000228918 FRA10AC1Q70Z53 315 aa16.04■□□□□ 0.16
LTBR-201ENST00000228918 CHST9Q7L1S5 443 aa16.04■□□□□ 0.16
LTBR-201ENST00000228918 TAS2R42Q7RTR8 314 aa16.04■□□□□ 0.16
LTBR-201ENST00000228918 OR4F6Q8NGB9 312 aa16.04■□□□□ 0.16
LTBR-201ENST00000228918 PDLIM5Q96HC4 596 aaKnown RBP16.04■□□□□ 0.16
LTBR-201ENST00000228918 NACA2Q9H009 215 aa16.04■□□□□ 0.16
LTBR-201ENST00000228918 POLR1BQ9H9Y6 1135 aa16.04■□□□□ 0.16
LTBR-201ENST00000228918 TLR9Q9NR96 1032 aa16.04■□□□□ 0.16
LTBR-201ENST00000228918 PKD2L2Q9NZM6 624 aa16.04■□□□□ 0.16
LTBR-201ENST00000228918 POLR3HQ9Y535 204 aaPredicted RBP16.04■□□□□ 0.16
LTBR-201ENST00000228918 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.03■□□□□ 0.16
LTBR-201ENST00000228918 A0A1B0GVM2 712 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 H3BMQ9 156 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 RSL1D1O76021 490 aaKnown RBP16.03■□□□□ 0.16
LTBR-201ENST00000228918 ATE1O95260 518 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 JAK1P23458 1154 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 HLCSP50747 726 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 ZNF177Q13360 481 aaPredicted RBP16.03■□□□□ 0.16
LTBR-201ENST00000228918 GTF2H2Q13888 395 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 CCNYL2Q5T2Q4 361 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 GTF2H2CQ6P1K8 395 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 KCTD8Q6ZWB6 473 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 ADAMTSL2Q86TH1 951 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 STK40Q8N2I9 435 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 C2orf15Q8WU43 125 aaKnown RBP16.03■□□□□ 0.16
LTBR-201ENST00000228918 ABTB1Q969K4 478 aaPredicted RBP16.03■□□□□ 0.16
LTBR-201ENST00000228918 COG8Q96MW5 612 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 DCUN1D5Q9BTE7 237 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 DHRS7Q9Y394 339 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 PCDHGA11Q9Y5H2 935 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 TNPO3Q9Y5L0 923 aaKnown RBP16.03■□□□□ 0.16
LTBR-201ENST00000228918 IFRD1O00458 451 aaPredicted RBP16.03■□□□□ 0.16
LTBR-201ENST00000228918 CD160O95971 181 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 ALBP02768 609 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 KLKB1P03952 638 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 HNRNPCP07910 306 aaKnown RBP eCLIP16.03■□□□□ 0.16
LTBR-201ENST00000228918 ANXA6P08133 673 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 GGT1P19440 569 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 SLC11A1P49279 550 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 ARSFP54793 590 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 TRAF3Q13114 568 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 PWP1Q13610 501 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 PLCL1Q15111 1095 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 FAM126BQ8IXS8 530 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 NUDT8Q8WV74 236 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 IFT80Q9P2H3 777 aaPredicted RBP16.03■□□□□ 0.16
LTBR-201ENST00000228918 HCSTQ9UBK5 93 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 ZNHIT2Q9UHR6 403 aa16.03■□□□□ 0.16
LTBR-201ENST00000228918 TMEM221A6NGB7 291 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 DEAF1O75398 565 aaPredicted RBP16.02■□□□□ 0.16
LTBR-201ENST00000228918 CNPP09543 421 aaKnown RBP16.02■□□□□ 0.16
LTBR-201ENST00000228918 RAP2AP10114 183 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 PRKAR2AP13861 404 aaKnown RBP16.02■□□□□ 0.16
LTBR-201ENST00000228918 YAP1P46937 504 aaKnown RBP16.02■□□□□ 0.16
LTBR-201ENST00000228918 ENTPD1P49961 510 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 GATMP50440 423 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 ALDH3A2P51648 485 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 DGKQP52824 942 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 PRKCZQ05513 592 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 CACNG1Q06432 222 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 TMED1Q13445 227 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 DAG1Q14118 895 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 ABRAXAS2Q15018 415 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 GPR162Q16538 588 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 AAK1Q2M2I8 961 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 AP5B1Q2VPB7 878 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 OTUD3Q5T2D3 398 aaPredicted RBP16.02■□□□□ 0.16
LTBR-201ENST00000228918 RNF219Q5W0B1 726 aaPredicted RBP16.02■□□□□ 0.16
LTBR-201ENST00000228918 CXorf57Q6NSI4 855 aaKnown RBP16.02■□□□□ 0.16
LTBR-201ENST00000228918 KLHL35Q6PF15 583 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 NCEH1Q6PIU2 408 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 ABI1Q8IZP0 508 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 TERB1Q8NA31 727 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 ZBTB8BQ8NAP8 495 aaPredicted RBP16.02■□□□□ 0.16
LTBR-201ENST00000228918 PDPRQ8NCN5 879 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 OR8J3Q8NGG0 315 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 ITFG1Q8TB96 612 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms