RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 SLC35C2Q9NQQ7 365 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 POLR3BQ9NW08 1133 aaPredicted RBP18.72■□□□□ 0.59
SMPD3-201ENST00000219334 ALDH4A1P30038 563 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 CASRP41180 1078 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 GRB14Q14449 540 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 ARSIQ5FYB1 569 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 SIDT2Q8NBJ9 832 aaKnown RBP18.72■□□□□ 0.59
SMPD3-201ENST00000219334 C11orf65Q8NCR3 313 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 AP3S1Q92572 193 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 LPIN3Q9BQK8 851 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 RASSF1Q9NS23 344 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 GKN1Q9NS71 199 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 KCND1Q9NSA2 647 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 IFNW1P05000 195 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 CD247P20963 164 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 CCND3P30281 292 aaPredicted RBP18.72■□□□□ 0.59
SMPD3-201ENST00000219334 PLA2G16P53816 162 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 HSPB3Q12988 150 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 ZYG11AQ6WRX3 759 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 GK5Q6ZS86 529 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 COQ7Q99807 217 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 CCDC28BQ9BUN5 200 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 NMBRP28336 390 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 CAPGP40121 348 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 CHN2P52757 468 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 MED22Q15528 200 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 SLC1A5Q15758 541 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 TMPRSS11AQ6ZMR5 421 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 MPP5Q8N3R9 675 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 DCBLD1Q8N8Z6 715 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 NEMP2A6NFY4 417 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 LRRC32Q14392 662 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 GLYATQ6IB77 296 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 SAPCD2Q86UD0 394 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 BPIFB1Q8TDL5 484 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 MCCC2Q9HCC0 563 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 ANKHQ9HCJ1 492 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 INTS10Q9NVR2 710 aaKnown RBP18.71■□□□□ 0.59
SMPD3-201ENST00000219334 CACNG4Q9UBN1 327 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 SRRM3A6NNA2 597 aaPredicted RBP18.71■□□□□ 0.59
SMPD3-201ENST00000219334 EDF1O60869 148 aaKnown RBP18.71■□□□□ 0.59
SMPD3-201ENST00000219334 KHDRBS3O75525 346 aaKnown RBP18.71■□□□□ 0.59
SMPD3-201ENST00000219334 SASH3O75995 380 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 WFS1O76024 890 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 TBX18O95935 607 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 DBTP11182 482 aaKnown RBP18.71■□□□□ 0.59
SMPD3-201ENST00000219334 PRPS2P11908 318 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 CYP4B1P13584 511 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 ACP5P13686 325 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 ISLR2Q6UXK2 745 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 RANBP3LQ86VV4 465 aaPredicted RBP18.71■□□□□ 0.59
SMPD3-201ENST00000219334 TSPAN14Q8NG11 270 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 KCTD13Q8WZ19 329 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 BTBD1Q9H0C5 482 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 ERVK-5Q9HDB9 667 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 PHF11Q9UIL8 331 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 FAM155BO75949 473 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 ASPAP45381 313 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 PGDP52209 483 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 PUS10Q3MIT2 529 aaKnown RBP18.71■□□□□ 0.59
SMPD3-201ENST00000219334 CLEC20AQ6ZU45 233 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 IRF2BP1Q8IU81 584 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 AVL9Q8NBF6 648 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 FAM81AQ8TBF8 368 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 ZNF599Q96NL3 588 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 PDCD10Q9BUL8 212 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 C15orf41Q9Y2V0 281 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 GPC6Q9Y625 555 aaPredicted RBP18.71■□□□□ 0.59
SMPD3-201ENST00000219334 B4DGG1 531 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 IDH3BO43837 385 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 RBMXL2O75526 392 aaKnown RBP18.71■□□□□ 0.59
SMPD3-201ENST00000219334 TNFP01375 233 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 NRIP1P48552 1158 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 ARRB1P49407 418 aaPredicted RBP18.71■□□□□ 0.59
SMPD3-201ENST00000219334 PCDH1Q08174 1060 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 GPR33Q49SQ1 333 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 DLK2Q6UY11 383 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 CLCC1Q96S66 551 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 MIPEPQ99797 713 aa18.71■□□□□ 0.59
SMPD3-201ENST00000219334 RIIAD1A6NNX1 92 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 HCN1O60741 890 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 PTPN5P54829 565 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 SNAPC1Q16533 368 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 KBTBD2Q8IY47 623 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 U3KQV3 271 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 C9IYK1 514 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 HAT1O14929 419 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 GJA9P57773 515 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 OC90Q02509 493 aaPredicted RBP18.7■□□□□ 0.58
SMPD3-201ENST00000219334 TXNDC8Q6A555 127 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 COX18Q8N8Q8 333 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 ILVBLA1L0T0 632 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 DCLK1O15075 740 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 TCEA1P23193 301 aaKnown RBP18.7■□□□□ 0.58
SMPD3-201ENST00000219334 ZNF846Q147U1 533 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 TTLQ8NG68 377 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 ZNF483Q8TF39 744 aaPredicted RBP18.7■□□□□ 0.58
SMPD3-201ENST00000219334 PPM1JQ5JR12 505 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 IRF7Q92985 503 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 OSBPL11Q9BXB4 747 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms