RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 SLC26A7Q8TE54 656 aa29.23■■■□□ 2.27
PABPN1-201ENST00000216727 RSPRY1Q96DX4 576 aa29.23■■■□□ 2.27
PABPN1-201ENST00000216727 RSRC1Q96IZ7 334 aaKnown RBP29.23■■■□□ 2.27
PABPN1-201ENST00000216727 NSUN3Q9H649 340 aaKnown RBP29.23■■■□□ 2.27
PABPN1-201ENST00000216727 NOL11Q9H8H0 719 aaKnown RBP29.23■■■□□ 2.27
PABPN1-201ENST00000216727 TMPRSS11EQ9UL52 423 aa29.23■■■□□ 2.27
PABPN1-201ENST00000216727 MATN4O95460 622 aa29.22■■■□□ 2.27
PABPN1-201ENST00000216727 IDO1P14902 403 aa29.22■■■□□ 2.27
PABPN1-201ENST00000216727 TIMP2P16035 220 aa29.22■■■□□ 2.27
PABPN1-201ENST00000216727 ERVPABLB-1P60509 514 aa29.22■■■□□ 2.27
PABPN1-201ENST00000216727 CEACAM7Q14002 265 aa29.22■■■□□ 2.27
PABPN1-201ENST00000216727 GOLGA7Q7Z5G4 137 aa29.22■■■□□ 2.27
PABPN1-201ENST00000216727 KBTBD6Q86V97 674 aa29.22■■■□□ 2.27
PABPN1-201ENST00000216727 NFKBIL1Q9UBC1 381 aaPredicted RBP29.22■■■□□ 2.27
PABPN1-201ENST00000216727 GIMAP2Q9UG22 337 aa29.22■■■□□ 2.27
PABPN1-201ENST00000216727 PCDHGA7Q9Y5G6 932 aa29.22■■■□□ 2.27
PABPN1-201ENST00000216727 BBIP1A8MTZ0 92 aa29.21■■■□□ 2.27
PABPN1-201ENST00000216727 OR4F21O95013 312 aa29.21■■■□□ 2.27
PABPN1-201ENST00000216727 CTSLP07711 333 aa29.21■■■□□ 2.27
PABPN1-201ENST00000216727 ME2P23368 584 aa29.21■■■□□ 2.27
PABPN1-201ENST00000216727 PSME3P61289 254 aa29.21■■■□□ 2.27
PABPN1-201ENST00000216727 GRIK2Q13002 908 aa29.21■■■□□ 2.27
PABPN1-201ENST00000216727 GTF2H2Q13888 395 aa29.21■■■□□ 2.27
PABPN1-201ENST00000216727 ZNF805Q5CZA5 627 aa29.21■■■□□ 2.27
PABPN1-201ENST00000216727 SULT1C3Q6IMI6 304 aa29.21■■■□□ 2.27
PABPN1-201ENST00000216727 GTF2H2CQ6P1K8 395 aa29.21■■■□□ 2.27
PABPN1-201ENST00000216727 PPFIBP2Q8ND30 876 aa29.21■■■□□ 2.27
PABPN1-201ENST00000216727 UBTD2Q8WUN7 234 aa29.21■■■□□ 2.27
PABPN1-201ENST00000216727 PCDH12Q9NPG4 1184 aa29.21■■■□□ 2.27
PABPN1-201ENST00000216727 RAD18Q9NS91 495 aa29.21■■■□□ 2.27
PABPN1-201ENST00000216727 TAPBPO15533 448 aa29.21■■■□□ 2.27
PABPN1-201ENST00000216727 GTF2A1P52655 376 aaPredicted RBP29.21■■■□□ 2.27
PABPN1-201ENST00000216727 PHKG1Q16816 387 aa29.21■■■□□ 2.27
PABPN1-201ENST00000216727 TCEAL5Q5H9L2 206 aa29.21■■■□□ 2.27
PABPN1-201ENST00000216727 TRIM68Q6AZZ1 485 aa29.21■■■□□ 2.27
PABPN1-201ENST00000216727 FAM109BQ6ICB4 259 aaPredicted RBP29.21■■■□□ 2.27
PABPN1-201ENST00000216727 C12orf76Q8N812 135 aaPredicted RBP29.21■■■□□ 2.27
PABPN1-201ENST00000216727 PYDC1Q8WXC3 89 aa29.21■■■□□ 2.27
PABPN1-201ENST00000216727 DNAJC9Q8WXX5 260 aa29.21■■■□□ 2.27
PABPN1-201ENST00000216727 FAM83DQ9H4H8 585 aa29.21■■■□□ 2.27
PABPN1-201ENST00000216727 BCAP29Q9UHQ4 241 aa29.21■■■□□ 2.27
PABPN1-201ENST00000216727 RPSAP08865 295 aaKnown RBP29.2■■■□□ 2.27
PABPN1-201ENST00000216727 MUM1Q2TAK8 710 aa29.2■■■□□ 2.27
PABPN1-201ENST00000216727 C18orf21Q32NC0 220 aaPredicted RBP29.2■■■□□ 2.27
PABPN1-201ENST00000216727 LETMD1Q6P1Q0 360 aa29.2■■■□□ 2.27
PABPN1-201ENST00000216727 HSD11B1LQ7Z5J1 315 aa29.2■■■□□ 2.27
PABPN1-201ENST00000216727 DLG3Q92796 817 aa29.2■■■□□ 2.27
PABPN1-201ENST00000216727 NAF1Q96HR8 494 aaKnown RBP29.2■■■□□ 2.27
PABPN1-201ENST00000216727 SPATA16Q9BXB7 569 aa29.2■■■□□ 2.27
PABPN1-201ENST00000216727 MRPL40Q9NQ50 206 aaKnown RBP29.2■■■□□ 2.27
PABPN1-201ENST00000216727 ELOVL2Q9NXB9 296 aa29.2■■■□□ 2.27
PABPN1-201ENST00000216727 OR7A17O14581 309 aa29.2■■■□□ 2.26
PABPN1-201ENST00000216727 OTCP00480 354 aa29.2■■■□□ 2.26
PABPN1-201ENST00000216727 CCR7P32248 378 aa29.2■■■□□ 2.26
PABPN1-201ENST00000216727 VIPR2P41587 438 aa29.2■■■□□ 2.26
PABPN1-201ENST00000216727 CDKL4Q5MAI5 379 aa29.2■■■□□ 2.26
PABPN1-201ENST00000216727 TMC5Q6UXY8 1006 aa29.2■■■□□ 2.26
PABPN1-201ENST00000216727 C12orf40Q86WS4 652 aa29.2■■■□□ 2.26
PABPN1-201ENST00000216727 ETFBKMTQ8IXQ9 262 aa29.2■■■□□ 2.26
PABPN1-201ENST00000216727 CDYL2Q8N8U2 506 aa29.2■■■□□ 2.26
PABPN1-201ENST00000216727 RHBDF1Q96CC6 855 aa29.2■■■□□ 2.26
PABPN1-201ENST00000216727 APOL5Q9BWW9 433 aa29.2■■■□□ 2.26
PABPN1-201ENST00000216727 RIC8BQ9NVN3 520 aa29.2■■■□□ 2.26
PABPN1-201ENST00000216727 CD84Q9UIB8 345 aa29.2■■■□□ 2.26
PABPN1-201ENST00000216727 PACSIN3Q9UKS6 424 aa29.2■■■□□ 2.26
PABPN1-201ENST00000216727 MRASO14807 208 aa29.19■■■□□ 2.26
PABPN1-201ENST00000216727 TULP3O75386 442 aa29.19■■■□□ 2.26
PABPN1-201ENST00000216727 GUCA1CO95843 209 aa29.19■■■□□ 2.26
PABPN1-201ENST00000216727 AOAHP28039 575 aa29.19■■■□□ 2.26
PABPN1-201ENST00000216727 GBX1Q14549 363 aa29.19■■■□□ 2.26
PABPN1-201ENST00000216727 C8orf82Q6P1X6 216 aaPredicted RBP29.19■■■□□ 2.26
PABPN1-201ENST00000216727 SNX31Q8N9S9 440 aa29.19■■■□□ 2.26
PABPN1-201ENST00000216727 ACOX2Q99424 681 aa29.19■■■□□ 2.26
PABPN1-201ENST00000216727 CD244Q9BZW8 370 aa29.19■■■□□ 2.26
PABPN1-201ENST00000216727 GPR45Q9Y5Y3 372 aa29.19■■■□□ 2.26
PABPN1-201ENST00000216727 ATP1B2P14415 290 aaPredicted RBP29.18■■■□□ 2.26
PABPN1-201ENST00000216727 XRCC1P18887 633 aaPredicted RBP29.18■■■□□ 2.26
PABPN1-201ENST00000216727 DPPA4Q7L190 304 aa29.18■■■□□ 2.26
PABPN1-201ENST00000216727 BPIFB1Q8TDL5 484 aa29.18■■■□□ 2.26
PABPN1-201ENST00000216727 ROPN1LQ96C74 230 aa29.18■■■□□ 2.26
PABPN1-201ENST00000216727 EGFL8Q99944 293 aa29.18■■■□□ 2.26
PABPN1-201ENST00000216727 ABCG8Q9H221 673 aa29.18■■■□□ 2.26
PABPN1-201ENST00000216727 BAG2O95816 211 aa29.18■■■□□ 2.26
PABPN1-201ENST00000216727 ACADSP16219 412 aa29.18■■■□□ 2.26
PABPN1-201ENST00000216727 ATP6V1C1P21283 382 aa29.18■■■□□ 2.26
PABPN1-201ENST00000216727 HSPA7P48741 367 aa29.18■■■□□ 2.26
PABPN1-201ENST00000216727 ST8SIA6P61647 398 aa29.18■■■□□ 2.26
PABPN1-201ENST00000216727 DUSP6Q16828 381 aa29.18■■■□□ 2.26
PABPN1-201ENST00000216727 PCYOX1LQ8NBM8 494 aa29.18■■■□□ 2.26
PABPN1-201ENST00000216727 METTL6Q8TCB7 284 aa29.18■■■□□ 2.26
PABPN1-201ENST00000216727 CDK15Q96Q40 435 aa29.18■■■□□ 2.26
PABPN1-201ENST00000216727 TMEM79Q9BSE2 394 aa29.18■■■□□ 2.26
PABPN1-201ENST00000216727 MTG2Q9H4K7 406 aa29.18■■■□□ 2.26
PABPN1-201ENST00000216727 IPPKQ9H8X2 491 aa29.18■■■□□ 2.26
PABPN1-201ENST00000216727 AIG1Q9NVV5 245 aa29.18■■■□□ 2.26
PABPN1-201ENST00000216727 TRIM38O00635 465 aa29.17■■■□□ 2.26
PABPN1-201ENST00000216727 TRAF3Q13114 568 aa29.17■■■□□ 2.26
PABPN1-201ENST00000216727 FLOT2Q14254 428 aa29.17■■■□□ 2.26
PABPN1-201ENST00000216727 RPS6KA2Q15349 733 aa29.17■■■□□ 2.26
PABPN1-201ENST00000216727 FAM78AQ5JUQ0 283 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms