RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 CBLBQ13191 982 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 ADAM15Q13444 863 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 SGCBQ16585 318 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 GLYATQ6IB77 296 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 KCTD9Q7L273 389 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 PLEKHH3Q7Z736 793 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 FAM13CQ8NE31 585 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 SMURF2Q9HAU4 748 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 LRTM1Q9HBL6 345 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 SPON1Q9HCB6 807 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 KCTD5Q9NXV2 234 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 TAS2R3Q9NYW6 316 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 TBC1D14Q9P2M4 693 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 YARS2Q9Y2Z4 477 aaKnown RBP14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 E9PAM4 449 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 PRAMEF1O95521 474 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 MC4RP32245 332 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 ZNF267Q14586 743 aaPredicted RBP14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 RNF220Q5VTB9 566 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 SLC30A10Q6XR72 485 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 LAS2Q8IYD9 372 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 NECAB3Q96P71 396 aaPredicted RBP14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 AGO4Q9HCK5 861 aaKnown RBP14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 H3BRB1 525 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 GJB6O95452 261 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 CRELD2Q6UXH1 353 aaPredicted RBP14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 C7orf57Q8NEG2 295 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 TBCBQ99426 244 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 TUT1Q9H6E5 874 aaKnown RBP14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 SNRNP200O75643 2136 aaKnown RBP14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 OR6C6A6NF89 314 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 H0YJX3 145 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 HOXB6P17509 224 aaKnown RBP14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 RAB27AP51159 221 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 GBX2P52951 348 aaPredicted RBP14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 C15orf59Q2T9L4 293 aaPredicted RBP14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 RBM20Q5T481 1227 aaKnown RBP14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 PIWIL4Q7Z3Z4 852 aaKnown RBP14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 P4HA3Q7Z4N8 544 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 MKLN1Q9UL63 735 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 AIPO00170 330 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 HDAC3O15379 428 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 C12orf50Q8NA57 414 aaPredicted RBP14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 RBM18Q96H35 190 aaKnown RBP14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 RNF38Q9H0F5 515 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 DNAJC18Q9H819 358 aa14.46□□□□□ -0.09
SPTLC2-201ENST00000216484 BANF1O75531 89 aa14.46□□□□□ -0.1
SPTLC2-201ENST00000216484 E2F1Q01094 437 aa14.46□□□□□ -0.1
SPTLC2-201ENST00000216484 HERC3Q15034 1050 aa14.46□□□□□ -0.1
SPTLC2-201ENST00000216484 NDUFA9Q16795 377 aa14.46□□□□□ -0.1
SPTLC2-201ENST00000216484 TMPRSS9Q7Z410 1059 aa14.46□□□□□ -0.1
SPTLC2-201ENST00000216484 CENPSQ8N2Z9 138 aa14.46□□□□□ -0.1
SPTLC2-201ENST00000216484 FEM1AQ9BSK4 669 aa14.46□□□□□ -0.1
SPTLC2-201ENST00000216484 TMED9Q9BVK6 235 aa14.46□□□□□ -0.1
SPTLC2-201ENST00000216484 IFT27Q9BW83 186 aa14.46□□□□□ -0.1
SPTLC2-201ENST00000216484 ZNF638Q14966 1978 aaKnown RBP14.46□□□□□ -0.1
SPTLC2-201ENST00000216484 ZNF726A6NNF4 738 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 CAPN14A8MX76 684 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 TACSTD2P09758 323 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 UBXN11Q5T124 520 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 RNASEH2BQ5TBB1 312 aaKnown RBP14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 SSX3Q99909 188 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 SEMA3CQ99985 751 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 UCK2Q9BZX2 261 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 SPATA7Q9P0W8 599 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 KIAA0556O60303 1618 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 OTOFQ9HC10 1997 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 E7EQ34 232 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 CABYRO75952 493 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 RELL1Q8IUW5 271 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 OXR1Q8N573 874 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 ALLCQ8N6M5 410 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 SUN3Q8TAQ9 357 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 HDAC7Q8WUI4 952 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 TSSK3Q96PN8 268 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 ATG13O75143 517 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 FCER2P06734 321 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 VARSP26640 1264 aaKnown RBP14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 MAGEA3P43357 314 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 OR12D2P58182 307 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 FOXO4P98177 505 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 AARDQ4LEZ3 155 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 SLC8B1Q6J4K2 584 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 AADACL2Q6P093 401 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 CDH19Q9H159 772 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 IGSF1Q8N6C5 1336 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 BBIP1A8MTZ0 92 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 FESP07332 822 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 SLC9A3P48764 834 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 SLC26A2P50443 739 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 ANKRD46Q86W74 232 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 PHTF2Q8N3S3 785 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 RP2O75695 350 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 CCNOP22674 350 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 TIE1P35590 1138 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 DUSP4Q13115 394 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 PDK4Q16654 411 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 TBC1D16Q8TBP0 767 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 PIWIL1Q96J94 861 aaKnown RBP14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 PCDHGB7Q9Y5F8 929 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms