RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 RIIAD1A6NNX1 92 aa13.41□□□□□ -0.26
SF3A1-201ENST00000215793 OR4F21O95013 312 aa13.41□□□□□ -0.26
SF3A1-201ENST00000215793 EOMESO95936 686 aa13.41□□□□□ -0.26
SF3A1-201ENST00000215793 IFNA6P05013 189 aa13.41□□□□□ -0.26
SF3A1-201ENST00000215793 NT5EP21589 574 aa13.41□□□□□ -0.26
SF3A1-201ENST00000215793 TAS2R39P59534 338 aa13.41□□□□□ -0.26
SF3A1-201ENST00000215793 RAPSNQ13702 412 aa13.41□□□□□ -0.26
SF3A1-201ENST00000215793 SMCO1Q147U7 214 aa13.41□□□□□ -0.26
SF3A1-201ENST00000215793 SLC10A6Q3KNW5 377 aa13.41□□□□□ -0.26
SF3A1-201ENST00000215793 ATAT1Q5SQI0 421 aa13.41□□□□□ -0.26
SF3A1-201ENST00000215793 VARS2Q5ST30 1063 aaKnown RBP13.41□□□□□ -0.26
SF3A1-201ENST00000215793 FAR1Q8WVX9 515 aa13.41□□□□□ -0.26
SF3A1-201ENST00000215793 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.41□□□□□ -0.26
SF3A1-201ENST00000215793 RUVBL1Q9Y265 456 aaKnown RBP13.41□□□□□ -0.26
SF3A1-201ENST00000215793 S100A9P06702 114 aaKnown RBP13.41□□□□□ -0.26
SF3A1-201ENST00000215793 GNAZP19086 355 aa13.41□□□□□ -0.26
SF3A1-201ENST00000215793 PSMD8P48556 350 aa13.41□□□□□ -0.26
SF3A1-201ENST00000215793 IL18R1Q13478 541 aa13.41□□□□□ -0.26
SF3A1-201ENST00000215793 TAF1AQ15573 450 aaPredicted RBP13.41□□□□□ -0.26
SF3A1-201ENST00000215793 CYP1B1Q16678 543 aa13.41□□□□□ -0.26
SF3A1-201ENST00000215793 PLA2G4EQ3MJ16 856 aa13.41□□□□□ -0.26
SF3A1-201ENST00000215793 AHI1Q8N157 1196 aa13.41□□□□□ -0.26
SF3A1-201ENST00000215793 BANPQ8N9N5 519 aa13.41□□□□□ -0.26
SF3A1-201ENST00000215793 HAVCR1Q96D42 359 aa13.41□□□□□ -0.26
SF3A1-201ENST00000215793 FZD8Q9H461 694 aa13.41□□□□□ -0.26
SF3A1-201ENST00000215793 APOBEC3GQ9HC16 384 aaKnown RBP13.41□□□□□ -0.26
SF3A1-201ENST00000215793 DTLQ9NZJ0 730 aa13.41□□□□□ -0.26
SF3A1-201ENST00000215793 CHRNB2P17787 502 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 CD247P20963 164 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 RFTN1Q14699 578 aaPredicted RBP13.4□□□□□ -0.26
SF3A1-201ENST00000215793 DCBLD1Q8N8Z6 715 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 DPEP3Q9H4B8 488 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 SLC28A3Q9HAS3 691 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 TRIM39Q9HCM9 518 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 GPN1Q9HCN4 374 aaPredicted RBP13.4□□□□□ -0.26
SF3A1-201ENST00000215793 ZDHHC4Q9NPG8 344 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 IQCF5A8MTL0 148 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 BTN3A3O00478 584 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 DLG1Q12959 904 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 COL9A3Q14050 684 aaPredicted RBP13.4□□□□□ -0.26
SF3A1-201ENST00000215793 OLFML2AQ68BL7 652 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 SNX20Q7Z614 316 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 NEK7Q8TDX7 302 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 CLEC4DQ8WXI8 215 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 PSMG2Q969U7 264 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 C11orf24Q96F05 449 aaPredicted RBP13.4□□□□□ -0.26
SF3A1-201ENST00000215793 FCRL4Q96PJ5 515 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 XPNPEP1Q9NQW7 623 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 ATXN10Q9UBB4 475 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 RWDD3Q9Y3V2 267 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 MAGEB17A8MXT2 336 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 HCN1O60741 890 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 UNGP13051 313 aaPredicted RBP13.4□□□□□ -0.26
SF3A1-201ENST00000215793 ELNP15502 786 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 DPYSL2Q16555 572 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 PLEKHG4Q58EX7 1191 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 AKAP14Q86UN6 197 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 CPNE9Q8IYJ1 553 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 EMID1Q96A84 441 aaPredicted RBP13.4□□□□□ -0.26
SF3A1-201ENST00000215793 NODALQ96S42 347 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 TNKS2Q9H2K2 1166 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 C12orf65Q9H3J6 166 aaKnown RBP13.4□□□□□ -0.26
SF3A1-201ENST00000215793 COL20A1Q9P218 1284 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 FKBPLQ9UIM3 349 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 PLIN4Q96Q06 1357 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 TFECO14948 347 aaPredicted RBP13.4□□□□□ -0.26
SF3A1-201ENST00000215793 ALDH4A1P30038 563 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 ARHGDIBP52566 201 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 ZNF155Q12901 538 aaPredicted RBP13.4□□□□□ -0.26
SF3A1-201ENST00000215793 GRB14Q14449 540 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 NIPA2Q8N8Q9 360 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 PIGXQ8TBF5 258 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 NTAN1Q96AB6 310 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 SMURF2Q9HAU4 748 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 CPQQ9Y646 472 aa13.4□□□□□ -0.26
SF3A1-201ENST00000215793 PIP5K1BO14986 540 aa13.39□□□□□ -0.27
SF3A1-201ENST00000215793 AREL1O15033 823 aa13.39□□□□□ -0.27
SF3A1-201ENST00000215793 PI15O43692 258 aa13.39□□□□□ -0.27
SF3A1-201ENST00000215793 IDH3AP50213 366 aa13.39□□□□□ -0.27
SF3A1-201ENST00000215793 PCDH1Q08174 1060 aa13.39□□□□□ -0.27
SF3A1-201ENST00000215793 OR14C36Q8NHC7 312 aa13.39□□□□□ -0.27
SF3A1-201ENST00000215793 METTL21AQ8WXB1 218 aa13.39□□□□□ -0.27
SF3A1-201ENST00000215793 HAPLN3Q96S86 360 aa13.39□□□□□ -0.27
SF3A1-201ENST00000215793 GRHL1Q9NZI5 618 aa13.39□□□□□ -0.27
SF3A1-201ENST00000215793 MAN2B2Q9Y2E5 1009 aa13.39□□□□□ -0.27
SF3A1-201ENST00000215793 DHRS7Q9Y394 339 aa13.39□□□□□ -0.27
SF3A1-201ENST00000215793 KLRG2A4D1S0 409 aaPredicted RBP13.39□□□□□ -0.27
SF3A1-201ENST00000215793 CCL22O00626 93 aa13.39□□□□□ -0.27
SF3A1-201ENST00000215793 STXBP1P61764 594 aaKnown RBP13.39□□□□□ -0.27
SF3A1-201ENST00000215793 KCTD19Q17RG1 926 aaPredicted RBP13.39□□□□□ -0.27
SF3A1-201ENST00000215793 C6orf52Q5T4I8 152 aa13.39□□□□□ -0.27
SF3A1-201ENST00000215793 PRR23CQ6ZRP0 262 aa13.39□□□□□ -0.27
SF3A1-201ENST00000215793 LIX1Q8N485 282 aa13.39□□□□□ -0.27
SF3A1-201ENST00000215793 MTMR14Q8NCE2 650 aa13.39□□□□□ -0.27
SF3A1-201ENST00000215793 FCRL5Q96RD9 977 aa13.39□□□□□ -0.27
SF3A1-201ENST00000215793 GORASP1Q9BQQ3 440 aa13.39□□□□□ -0.27
SF3A1-201ENST00000215793 EIF2B4Q9UI10 523 aaKnown RBP13.39□□□□□ -0.27
SF3A1-201ENST00000215793 IQCMA0A1B0GVH7 501 aa13.39□□□□□ -0.27
SF3A1-201ENST00000215793 CCL16O15467 120 aa13.39□□□□□ -0.27
SF3A1-201ENST00000215793 SEPT4O43236 478 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms