RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 Q6ZSR9 355 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 RBM12BQ8IXT5 1001 aaKnown RBP14.88□□□□□ -0.03
EFNB1-201ENST00000204961 ADGRG2Q8IZP9 1017 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 TRPV3Q8NET8 790 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 UPF1Q92900 1129 aaKnown RBP eCLIP14.88□□□□□ -0.03
EFNB1-201ENST00000204961 FOXJ1Q92949 421 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 SLC22A12Q96S37 553 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 PKMYT1Q99640 499 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 ATG10Q9H0Y0 220 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 SYTL2Q9HCH5 934 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 RASSF1Q9NS23 344 aa14.88□□□□□ -0.03
EFNB1-201ENST00000204961 M0QZQ0 153 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 FGF1P05230 155 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 CSRP3P50461 194 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 VAC14Q08AM6 782 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 NFE2Q16621 373 aaPredicted RBP14.87□□□□□ -0.03
EFNB1-201ENST00000204961 UAP1L1Q3KQV9 507 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 PROKR1Q8TCW9 393 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 SLC39A13Q96H72 371 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 BBS2Q9BXC9 721 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 RNF38Q9H0F5 515 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 SMPD3Q9NY59 655 aaPredicted RBP14.87□□□□□ -0.03
EFNB1-201ENST00000204961 GPR45Q9Y5Y3 372 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 A0A087WXM4 84 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 SLC25A14O95258 325 aaPredicted RBP14.87□□□□□ -0.03
EFNB1-201ENST00000204961 CLDN7O95471 211 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 NTRK1P04629 796 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 IDO1P14902 403 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 TNK2Q07912 1038 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 IL10RBQ08334 325 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 CYP27C1Q4G0S4 372 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 PPP4R4Q6NUP7 873 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 PRR23BQ6ZRT6 265 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 RHNO1Q9BSD3 238 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 SLC2A11Q9BYW1 496 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 CARS2Q9HA77 564 aaKnown RBP14.87□□□□□ -0.03
EFNB1-201ENST00000204961 MRPL40Q9NQ50 206 aaKnown RBP14.87□□□□□ -0.03
EFNB1-201ENST00000204961 ADGRE2Q9UHX3 823 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 PRSS21Q9Y6M0 314 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 CASP8AP2Q9UKL3 1982 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 A0A1W2PP18 115 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 MTMR11A4FU01 709 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 SMAD6O43541 496 aaKnown RBP14.87□□□□□ -0.03
EFNB1-201ENST00000204961 PRAMEF11O60813 436 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 NOL3O60936 208 aaKnown RBP14.87□□□□□ -0.03
EFNB1-201ENST00000204961 GLUD1P00367 558 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 CST1P01037 141 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 LPOP22079 712 aaPredicted RBP14.87□□□□□ -0.03
EFNB1-201ENST00000204961 ITPKAP23677 461 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 ADSLP30566 484 aaPredicted RBP14.87□□□□□ -0.03
EFNB1-201ENST00000204961 PRKG2Q13237 762 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 OR56A4Q8NGH8 313 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 EGLN2Q96KS0 407 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 C9orf16Q9BUW7 83 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 TRIM15Q9C019 465 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 PKD2L2Q9NZM6 624 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 BLOC1S6Q9UL45 172 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 SCML2Q9UQR0 700 aa14.87□□□□□ -0.03
EFNB1-201ENST00000204961 TBL1XO60907 577 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 PRKD3O94806 890 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 FTH1P02794 183 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 ALDH2P05091 517 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 MATN1P21941 496 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 HOXD9P28356 352 aaPredicted RBP14.86□□□□□ -0.03
EFNB1-201ENST00000204961 ATP5C1P36542 298 aaKnown RBP14.86□□□□□ -0.03
EFNB1-201ENST00000204961 CHRNB3Q05901 458 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 MADCAM1Q13477 382 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 BOP1Q14137 746 aaKnown RBP14.86□□□□□ -0.03
EFNB1-201ENST00000204961 CYP20A1Q6UW02 462 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 PTCD2Q8WV60 388 aaKnown RBP14.86□□□□□ -0.03
EFNB1-201ENST00000204961 SDR39U1Q9NRG7 319 aaPredicted RBP14.86□□□□□ -0.03
EFNB1-201ENST00000204961 SLC6A13Q9NSD5 602 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 SEPT3Q9UH03 358 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 PCTPQ9UKL6 214 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 SLC8A2Q9UPR5 921 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 SZT2Q5T011 3432 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 hCG_2039718K7EN88 272 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 KERAO60938 352 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 HRH2P25021 359 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 CBLBQ13191 982 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 CTSL3PQ5NE16 218 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 ZNF648Q5T619 568 aaPredicted RBP14.86□□□□□ -0.03
EFNB1-201ENST00000204961 GALNT18Q6P9A2 607 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 PATL1Q86TB9 770 aaKnown RBP14.86□□□□□ -0.03
EFNB1-201ENST00000204961 KIAA1191Q96A73 305 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 HPS4Q9NQG7 708 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 AGPAT4Q9NRZ5 378 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 LOC285095A0A1B0GVY8 99 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 ANKRD66B4E2M5 251 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 CPSF4O95639 269 aaKnown RBP14.86□□□□□ -0.03
EFNB1-201ENST00000204961 PRLP01236 227 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 S100BP04271 92 aaPredicted RBP14.86□□□□□ -0.03
EFNB1-201ENST00000204961 HLA-DPA1P20036 260 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 TRIP4Q15650 581 aaPredicted RBP14.86□□□□□ -0.03
EFNB1-201ENST00000204961 KANK2Q63ZY3 851 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 HS6ST3Q8IZP7 471 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 C10orf111Q8N326 155 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 LIX1Q8N485 282 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 CNIH3Q8TBE1 160 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 WFDC5Q8TCV5 224 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms