RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 RAP2AP10114 183 aa10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 JUNBP17275 347 aaPredicted RBP10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 JAK1P23458 1154 aa10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 IDUAP35475 653 aa10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 STC1P52823 247 aa10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 LSM3P62310 102 aaKnown RBP10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 ADAM17P78536 824 aa10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 EFEMP1Q12805 493 aa10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 ZNF235Q14590 738 aa10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 UPP1Q16831 310 aa10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 SPATS1Q496A3 300 aa10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 RAP1GAP2Q684P5 730 aa10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 CCSAPQ6IQ19 270 aaPredicted RBP10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 SPESP1Q6UW49 350 aa10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 ENPP6Q6UWR7 440 aa10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 C11orf74Q86VG3 221 aa10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 MIB1Q86YT6 1006 aa10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 SERPINB11Q96P15 392 aa10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 CGREF1Q99674 301 aa10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 TBCDQ9BTW9 1192 aa10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 PARVBQ9HBI1 364 aa10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 COMMD8Q9NX08 183 aa10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 ABI2Q9NYB9 513 aaPredicted RBP10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 PDE10AQ9Y233 779 aa10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 PCDHB3Q9Y5E6 796 aa10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 COMMD10Q9Y6G5 202 aa10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 FNDC1Q4ZHG4 1894 aaPredicted RBP10.39□□□□□ -0.75
CX3CL1-201ENST00000006053 F8W810 466 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 BCAS1O75363 584 aaPredicted RBP10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 CST1P01037 141 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 RPS17P08708 135 aaKnown RBP10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 PRKACGP22612 351 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 ACVRL1P37023 503 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 PIGAP37287 484 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 TBX4P57082 545 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 SKIV2LQ15477 1246 aaKnown RBP10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 PTPRNQ16849 979 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 C6orf141Q5SZD1 244 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 TTC23Q5W5X9 447 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 SULT1C3Q6IMI6 304 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 MSANTD2Q6P1R3 559 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 AGMOQ6ZNB7 445 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 GPRIN3Q6ZVF9 776 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 ABI1Q8IZP0 508 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 UMODL1-AS1Q8N2C9 162 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 ANKK1Q8NFD2 765 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 OR52B6Q8NGF0 335 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 OR56A4Q8NGH8 313 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 FUBP1Q96AE4 644 aaKnown RBP10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 CDKN2AIPNLQ96HQ2 116 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 CNDP2Q96KP4 475 aaKnown RBP10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 THUMPD3Q9BV44 507 aaKnown RBP10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 FAM118AQ9NWS6 357 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 UTS2RQ9UKP6 389 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 ACTL7AQ9Y615 435 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 LOC285095A0A1B0GVY8 99 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 SYCE1LA8MT33 242 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 MUSKO15146 869 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 HS6ST1O60243 411 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 TSPAN3O60637 253 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 KATNA1O75449 491 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 TBX18O95935 607 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 PRR35P0CG20 571 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 G6PDP11413 515 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 RHOQP17081 205 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 TCEA1P23193 301 aaKnown RBP10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 GSTM2P28161 218 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 ALDH4A1P30038 563 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 CDKN1CP49918 316 aaPredicted RBP10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 HTR6P50406 440 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 TUBA3CQ13748 450 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 SPIDRQ14159 915 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 NR6A1Q15406 480 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 MS4A13Q5J8X5 152 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 IL27RAQ6UWB1 636 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 ZNF467Q7Z7K2 595 aaPredicted RBP10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 ZFAND4Q86XD8 727 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 IGSF8Q969P0 613 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 RMDN1Q96DB5 314 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 MAGED4Q96JG8 741 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 SMIM14Q96QK8 99 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 BRINP2Q9C0B6 783 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 DERL2Q9GZP9 239 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 GPN2Q9H9Y4 310 aaPredicted RBP10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 CARS2Q9HA77 564 aaKnown RBP10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 PALMDQ9NP74 551 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 PCDH12Q9NPG4 1184 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 ZIM2Q9NZV7 527 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 PCTPQ9UKL6 214 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 CCL15-CCL14A0A0B4J2E2 113 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 M0QZ92 97 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 KPNA4O00629 521 aaPredicted RBP10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 RAMP2O60895 175 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 INMTO95050 263 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 HTR1BP28222 390 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 SUOXP51687 545 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 IL1RL1Q01638 556 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 CCL15Q16663 113 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 RBM48Q5RL73 367 aaKnown RBP10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 GTF2IRD2BQ6EKJ0 949 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms