RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 B3gnt7Q8K0J2 397 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 MfrpQ8K480 584 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ces2aQ8QZR3 558 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Batf2Q8R1H8 277 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Olfr665Q8VG79 316 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Far1Q922J9 515 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Cyp4f3Q99N16 524 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 CatsperzQ9CQP8 194 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ccdc81Q9D5W4 654 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Wdr12Q9JJA4 423 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Maged1Q9QYH6 775 aaKnown RBP9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Katna1Q9WV86 491 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Smurf2A2A5Z6 748 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Olfr1123A2AT85 323 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Prrg1A2BFE8 218 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Tmem233D3Z1U7 110 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Mllt10O54826 1068 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Klf10O89091 479 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 MaxP28574 160 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 GlrbP48168 496 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 CtswP56203 371 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 NfycP70353 335 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Hdgfl2Q3UMU9 669 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Pnpla1Q3V1D5 599 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 IspdQ5RJG7 447 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 RbfaQ6P3B9 350 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Suz12Q80U70 741 aaKnown RBP9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Fut11Q8BHC9 489 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Eme1Q8BJW7 570 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 DrgxQ8BYH0 263 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Tmem252Q8C353 183 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Fam110bQ8C739 366 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Smoc2Q8CD91 447 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 BroxQ8K2Q7 411 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Defb19Q8K3I8 83 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Olfr1414Q8VGU5 312 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Socs7Q8VHQ2 579 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Kiaa2013Q91X21 634 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Chid1Q922Q9 393 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 MpstQ99J99 297 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Sdcbp2Q99JZ0 292 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Q99LU8 229 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Mrps18aQ99N85 196 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ndufb5Q9CQH3 189 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Zswim7Q9CWQ2 152 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gbe1Q9D6Y9 702 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Dnajb4Q9D832 337 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Upf1Q9EPU0 1124 aaKnown RBP9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ak1Q9R0Y5 194 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Zfp563B8JJZ9 448 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 C7D3YXF5 845 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Slc9a3G3X939 829 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 PigfO09101 219 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 H2-M9O19442 342 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Kpna4O35343 521 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Nrp2O35375 931 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 MaptP10637 733 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Cyp2a12P56593 492 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 CkbQ04447 381 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ccdc61Q3UJV1 511 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Zfp280bQ505F4 534 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Pcdhga7Q6DD96 935 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Dlgap3Q6PFD5 977 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Olfr1085Q7TR64 313 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Vtcn1Q7TSP5 283 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 IfneQ80ZF2 192 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ttc24Q8BYG0 334 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Pitrm1Q8K411 1036 aaKnown RBP9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Fam20bQ8VCS3 409 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Vps4aQ8VEJ9 437 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Olfr801Q8VEU1 318 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Imp4Q8VHZ7 291 aaKnown RBP9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Fuca1Q99LJ1 452 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ankrd61Q9CQM6 421 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Mgrn1Q9D074 532 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Cyp2c55Q9D816 490 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ndufs3Q9DCT2 263 aaKnown RBP9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Trhr2Q9ERT2 382 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Sae1Q9R1T2 350 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Epb41l1Q9Z2H5 879 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 DnpepQ9Z2W0 473 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Rad21l1A2AU37 552 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Mknk1O08605 427 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ncam2O35136 837 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Usp2O88623 613 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gna12P27600 379 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gpr149Q3UVY1 732 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Tfap2cQ61312 449 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 DgkbQ6NS52 802 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Dpy19l3Q71B07 716 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Fastkd5Q7TMV3 762 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Hyal5Q812F3 526 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ofcc1Q8BGX4 166 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Slc35e2Q8C811 405 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 SntnQ8C9X1 147 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Pcolce2Q8R4W6 414 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Retreg1dQ8VE91 480 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Barhl2Q8VIB5 384 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Retreg3Q9CQV4 466 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Cby3Q9CVN6 235 aa9.61□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms