RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Riok2Q9CQS5 547 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Rin2Q9D684 903 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm2022A0A1Y7VLT7 144 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Serpinb9eO08806 377 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Aff2O55112 1272 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Cdc25bP30306 576 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 1810049J17RikQ3V2G9 153 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Klhl6Q6V595 619 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Eif4bQ8BGD9 611 aaKnown RBP10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Cndp1Q8BUG2 492 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Bmt2Q8BXK4 403 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Saysd1Q8K190 188 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Sumf1Q8R0F3 372 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Olfr30Q8VGD8 315 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Olfr570Q8VH12 312 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 March2Q99M02 246 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Scgb2b17S4R2V3 82 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Kcna10B2RQA1 511 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 4930544D05RikJ3QK56 214 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Tnfrsf11aO35305 625 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Svs4P18419 113 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Nkiras2Q9CR56 191 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Zfp84Q9D654 559 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Fundc2Q9D6K8 151 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 H2-Q8P14430 326 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 H2-Q6P79568 326 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Dppa5bP85965 119 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 CblbQ3TTA7 982 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gabbr2Q80T41 940 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Slc39a9Q8BFU1 308 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Olfr1122Q8VGT9 326 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Rnh1Q91VI7 456 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Pskh1Q91YA2 424 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Dpp6Q9Z218 804 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Tatdn2B7ZNL9 783 aaKnown RBP10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 PargO88622 969 aaKnown RBP10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gstm1P10649 218 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Lgals3bpQ07797 577 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Q3KQP7 184 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Vars2Q3U2A8 1060 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm29609Q3UU56 907 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Zscan26Q5RJ54 466 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gtf3c2Q8BL74 907 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Snx8Q8CFD4 459 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Eva1bQ8K2Y3 164 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Rhobtb2Q91V93 728 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Cxxc5Q91WA4 317 aaKnown RBP10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Elp3Q9CZX0 547 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 IkbkeQ9R0T8 717 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Smim10l2aA0A0B4J1F8 78 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Sult6b2B7ZWN4 290 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Esp34G3UXG0 151 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Arhgap39P59281 1107 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gabarapl2P60521 117 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Il17aQ62386 158 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Mrps7Q80X85 242 aaKnown RBP10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gpr150Q8BL07 427 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gpat3Q8C0N2 438 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Rfwd3Q8CIK8 774 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 IqchQ9D2K4 1071 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 A0A286YDM2 672 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Skint3A7TZF0 458 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Ccnb2P30276 398 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 SirpaP97797 513 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Uimc1Q5U5Q9 727 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Ptk7Q8BKG3 1062 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Serpinb9dQ8BMT0 377 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Tprg1Q8CB49 279 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 DdoQ922Z0 341 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Abcb8Q9CXJ4 717 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm6401L7N2C0 213 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 UgcgO88693 394 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Eif5aP63242 154 aaKnown RBP10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 H2-Q2Q4KN81 360 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Olfr20Q7TRX9 314 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Lacc1Q8BZT9 430 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Kctd12bQ8C7J6 292 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Metap1dQ9CPW9 335 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Det1Q9D0A0 550 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Mpp5Q9JLB2 675 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Slamf1Q9QUM4 343 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 HnrnpdlQ9Z130 301 aaKnown RBP10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Hcn4O70507 1186 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Tmem184cQ3TPR7 525 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Lrrc14bQ3UJB3 510 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Lgr6Q3UVD5 967 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 RadilQ69Z89 1099 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 4933402J07RikQ8BHX0 270 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Vrk2Q8BN21 503 aaKnown RBP10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Pyhin1Q8BV49 420 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Ptrh1Q8BW00 204 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Cant1Q8VCF1 403 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Ebna1bp2Q9D903 306 aaKnown RBP10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Slc19a2Q9EQN9 498 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Tor1bQ9ER41 336 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Praf2Q9JIG8 178 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Nectin3Q9JLB9 549 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Tubgcp6G5E8P0 1769 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Fbxo47A2A6H3 451 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Vmn2r17E9PYF5 849 aa10.03□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 64.4 ms