RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Dach2Q925Q8 634 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Tcam1Q99NB3 548 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Hm13Q9D8V0 378 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Htatip2Q9Z2G9 242 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Sept5Q9Z2Q6 369 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Col5a3Q9JLI2 1739 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Ism1A2ATD1 454 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Zfp558E9Q1J0 407 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Cyp2b23E9Q593 491 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Gm6614M0QWR8 670 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Tpst1O70281 370 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 MaptP10637 733 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 PlaaP27612 794 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Folr1P35846 255 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 DckP43346 260 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Kcnab3P97382 249 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Gdpgp1Q3TLS3 386 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Taf1cQ6PDZ2 836 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Btnl1Q7TST0 509 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Spata7Q80VP2 582 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Zmym6Q8BS54 1249 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Slco1a5Q91YY5 670 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Q9D454 513 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Sh2d4aQ9D7V1 421 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Cntd1Q9D995 334 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Ccdc97Q9DBT3 340 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 4933424G06RikA0A140LIP3 267 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 A6H6Q4 206 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Itih4A6X935 942 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Stc1O55183 247 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Kcnj9P48543 393 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Rnf19aP50636 840 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Cyp2c39P56656 490 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 IdsQ08890 552 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Q3KNL4 93 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Hesx1Q61658 185 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 BegainQ68EF6 600 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Slc25a23Q6GQS1 467 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Kcng4Q80XM3 506 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 HadhaQ8BMS1 763 aaKnown RBP18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Fignl1Q8BPY9 683 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Parp12Q8BZ20 711 aaKnown RBP18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Phtf2Q8CB19 747 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Cacnb2Q8CC27 655 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Olfr677Q8VF06 312 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Lrrc17Q9CXD9 443 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Mrpl45Q9D0Q7 306 aaKnown RBP18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Dcdc2cQ9D1B8 347 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Gm4869A0A1B0GSG7 984 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Neurod4O09105 330 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Klf10O89091 479 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 LifP09056 203 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Oas1aP11928 367 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 HmgclP38060 325 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 MtpnP62774 118 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Rps24P62849 133 aaKnown RBP18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Pla2g5P97391 137 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 ArvcfP98203 962 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Trim40Q3UWA4 246 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 FaddQ61160 205 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Naa50Q6PGB6 169 aaKnown RBP18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Defb34Q7TNV8 81 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Coq4Q8BGB8 266 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Smoc1Q8BLY1 463 aaKnown RBP18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Oas1gQ8K469 367 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Mmgt2Q8R3L0 123 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Olfr348Q8VGK3 313 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Pcdha8Q91Y12 946 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Ddi1Q9DAF3 408 aa18.49■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Gm17175E9Q528 179 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Gm10715J3QP74 227 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 RbpjlO08674 515 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 KlO35082 1014 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Scg5P12961 212 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Sept4P28661 478 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Ptger3P30557 365 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 PamP97467 979 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Gm1604bQ3TRG0 118 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Magee2Q52KG3 523 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Arnt2Q61324 712 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Ifi47Q61635 420 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Defa17Q64016 82 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Wnt8aQ64527 354 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Mgat5bQ765H6 792 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Tspan12Q8BKT6 305 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 4932411N23RikQ8C0S0 470 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Tmc7Q8C428 726 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Fam221bQ8C627 487 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Pabpc5Q8C7D3 381 aaKnown RBP18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Ago1Q8CJG1 857 aaKnown RBP18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Nudt4Q8R2U6 179 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Brd8Q8R3B7 951 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 AdprmQ99KS6 340 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 St7Q99M96 577 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Atp6ap2Q9CYN9 350 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Rnf146Q9CZW6 359 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 TesclQ9DAJ7 231 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 VapaQ9WV55 249 aaKnown RBP18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Olfr1153A2AVC0 318 aa18.48■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 S100zB9EJL3 99 aa18.48■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms