RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 SUFUQ9UMX1 484 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 GPR34Q9UPC5 381 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 MED16Q9Y2X0 877 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 A0A096LPK6 155 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 PRSS38A1L453 326 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 SCAMP1O15126 338 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 MAGEC1O60732 1142 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 DNAJC6O75061 913 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 SYF2O95926 243 aaKnown RBP17.2■□□□□ 0.34
PHGDH-230ENST00000641927 SKIV2L2P42285 1042 aaKnown RBP17.2■□□□□ 0.34
PHGDH-230ENST00000641927 GNPDA1P46926 289 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 NUBP1P53384 320 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 TIAL1Q01085 375 aaKnown RBP eCLIP17.2■□□□□ 0.34
PHGDH-230ENST00000641927 BOP1Q14137 746 aaKnown RBP17.2■□□□□ 0.34
PHGDH-230ENST00000641927 BCL7AQ4VC05 210 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 TTMPQ5BVD1 217 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 AGBL2Q5U5Z8 902 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 ZNF547Q8IVP9 402 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 TSACCQ96A04 125 aaPredicted RBP17.2■□□□□ 0.34
PHGDH-230ENST00000641927 SMC6Q96SB8 1091 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 RMI1Q9H9A7 625 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 CARS2Q9HA77 564 aaKnown RBP17.2■□□□□ 0.34
PHGDH-230ENST00000641927 GPSM3Q9Y4H4 160 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 PCYT1BQ9Y5K3 369 aaPredicted RBP17.2■□□□□ 0.34
PHGDH-230ENST00000641927 CHUKO15111 745 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 POP7O75817 140 aaKnown RBP17.2■□□□□ 0.34
PHGDH-230ENST00000641927 FUCA1P04066 466 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 WNT1P04628 370 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 MPOP05164 745 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 C2P06681 752 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 GNSP15586 552 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 CCR7P32248 378 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 CSNK1EP49674 416 aaKnown RBP17.2■□□□□ 0.34
PHGDH-230ENST00000641927 CLCN7P51798 805 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 AFF3P51826 1226 aaKnown RBP17.2■□□□□ 0.34
PHGDH-230ENST00000641927 MAGOHP61326 146 aaKnown RBP17.2■□□□□ 0.34
PHGDH-230ENST00000641927 ZKSCAN8Q15776 578 aaPredicted RBP17.2■□□□□ 0.34
PHGDH-230ENST00000641927 SYTL3Q4VX76 610 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 PAQR3Q6TCH7 311 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 CHST15Q7LFX5 561 aaPredicted RBP17.2■□□□□ 0.34
PHGDH-230ENST00000641927 IQCHQ86VS3 1027 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 ZBTB2Q8N680 514 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 C1orf216Q8TAB5 229 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 OR1E3Q8WZA6 343 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 ISL2Q96A47 359 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 PDXPQ96GD0 296 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 ZC3H10Q96K80 434 aaKnown RBP17.2■□□□□ 0.34
PHGDH-230ENST00000641927 PKNOX2Q96KN3 472 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 SLC30A3Q99726 388 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 SLC13A1Q9BZW2 595 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 SENP1Q9P0U3 644 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 TSR3Q9UJK0 312 aaKnown RBP17.2■□□□□ 0.34
PHGDH-230ENST00000641927 ACOT9Q9Y305 439 aa17.2■□□□□ 0.34
PHGDH-230ENST00000641927 GON4LQ3T8J9 2241 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 SPTY2D1-AS1A0A0U1RR47 76 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 A0A1W2PR77 199 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 TLR4O00206 839 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 KMOO15229 486 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 LILRB5O75023 590 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 SLC35E2BP0CK96 405 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 GMPRP36959 345 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 C21orf59P57076 290 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 SRP54P61011 504 aaKnown RBP17.19■□□□□ 0.34
PHGDH-230ENST00000641927 IRF9Q00978 393 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 HSPA14Q0VDF9 509 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 OVGP1Q12889 678 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 LPAL2Q16609 132 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 INSCQ1MX18 579 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 TNFAIP8L3Q5GJ75 292 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 TBC1D1Q86TI0 1168 aaPredicted RBP17.19■□□□□ 0.34
PHGDH-230ENST00000641927 EXOC3L1Q86VI1 746 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 DCP2Q8IU60 420 aaKnown RBP17.19■□□□□ 0.34
PHGDH-230ENST00000641927 HID1Q8IV36 788 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 GIMAP7Q8NHV1 300 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 CD200R1Q8TD46 325 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 PIGKQ92643 395 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 INPP5DQ92835 1189 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 SKA1Q96BD8 255 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 CABS1Q96KC9 395 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 POPDC3Q9HBV1 291 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 MED4Q9NPJ6 270 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 TM7SF3Q9NS93 570 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 DNAJC16Q9Y2G8 782 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 DHRS7Q9Y394 339 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 USP34Q70CQ2 3546 aa17.19■□□□□ 0.34
PHGDH-230ENST00000641927 HMGB1P1B2RPK0 211 aaPredicted RBP17.18■□□□□ 0.34
PHGDH-230ENST00000641927 KPNA5O15131 536 aa17.18■□□□□ 0.34
PHGDH-230ENST00000641927 APOA4P06727 396 aa17.18■□□□□ 0.34
PHGDH-230ENST00000641927 ACP5P13686 325 aa17.18■□□□□ 0.34
PHGDH-230ENST00000641927 MAGEA12P43365 314 aa17.18■□□□□ 0.34
PHGDH-230ENST00000641927 PPARDQ03181 441 aa17.18■□□□□ 0.34
PHGDH-230ENST00000641927 TCEA2Q15560 299 aa17.18■□□□□ 0.34
PHGDH-230ENST00000641927 TEAD4Q15561 434 aa17.18■□□□□ 0.34
PHGDH-230ENST00000641927 TTLL9Q3SXZ7 439 aa17.18■□□□□ 0.34
PHGDH-230ENST00000641927 PYCR3Q53H96 274 aa17.18■□□□□ 0.34
PHGDH-230ENST00000641927 ZNF542PQ5EBM4 170 aa17.18■□□□□ 0.34
PHGDH-230ENST00000641927 AMZ2Q86W34 360 aa17.18■□□□□ 0.34
PHGDH-230ENST00000641927 CPNE9Q8IYJ1 553 aa17.18■□□□□ 0.34
PHGDH-230ENST00000641927 CFAP206Q8IYR0 622 aa17.18■□□□□ 0.34
PHGDH-230ENST00000641927 SPATA6LQ8N4H0 392 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms