RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 LRRC1Q9BTT6 524 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 TBC1D10AQ9BXI6 508 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 TRIM31Q9BZY9 425 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 TBC1D29Q9UFV1 150 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 PCYOX1Q9UHG3 505 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 PHTF1Q9UMS5 762 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 KCNK6Q9Y257 313 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 DRG1Q9Y295 367 aaKnown RBP9.9□□□□□ -0.82
PHGDH-222ENST00000641587 TTLL3Q9Y4R7 772 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 TMEM184BQ9Y519 407 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-222ENST00000641587 OAS3Q9Y6K5 1087 aaKnown RBP9.9□□□□□ -0.82
PHGDH-222ENST00000641587 KCNK1O00180 336 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 CAPN5O15484 640 aaPredicted RBP9.89□□□□□ -0.83
PHGDH-222ENST00000641587 MAFKO60675 156 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 ASMTLO95671 621 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 PDGFAP04085 211 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 RNF224P0DH78 156 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 CCNCP24863 283 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 TEAD1P28347 426 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 STAT5AP42229 794 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 PTGIRP43119 386 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 RENBPP51606 427 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 TERF1P54274 439 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 GDF10P55107 478 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 GFERP55789 205 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 TUBB4BP68371 445 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 KLRB1Q12918 225 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 GLE1Q53GS7 698 aaKnown RBP9.89□□□□□ -0.83
PHGDH-222ENST00000641587 ADAMTSL4Q6UY14 1074 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 ARHGEF18Q6ZSZ5 1173 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 SYDE1Q6ZW31 735 aaPredicted RBP9.89□□□□□ -0.83
PHGDH-222ENST00000641587 PRUNE1Q86TP1 453 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 GALNT13Q8IUC8 556 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.89□□□□□ -0.83
PHGDH-222ENST00000641587 PIH1D2Q8WWB5 315 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 AP2M1Q96CW1 435 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 SCRN2Q96FV2 425 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 TEFMQ96QE5 360 aaKnown RBP9.89□□□□□ -0.83
PHGDH-222ENST00000641587 MCCC1Q96RQ3 725 aaPredicted RBP9.89□□□□□ -0.83
PHGDH-222ENST00000641587 DPYSL5Q9BPU6 564 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 CEP41Q9BYV8 373 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 RAB17Q9H0T7 212 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 DPH5Q9H2P9 285 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 SIDT1Q9NXL6 827 aaKnown RBP9.89□□□□□ -0.83
PHGDH-222ENST00000641587 KLHL8Q9P2G9 620 aaPredicted RBP9.89□□□□□ -0.83
PHGDH-222ENST00000641587 UTP11Q9Y3A2 253 aaKnown RBP9.89□□□□□ -0.83
PHGDH-222ENST00000641587 KCNMB2Q9Y691 235 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 RPS6KL1Q9Y6S9 549 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 NOTCH2Q04721 2471 aa9.89□□□□□ -0.83
PHGDH-222ENST00000641587 F5H423 210 aaPredicted RBP9.88□□□□□ -0.83
PHGDH-222ENST00000641587 PSMD11O00231 422 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 POLR1CO15160 346 aaPredicted RBP9.88□□□□□ -0.83
PHGDH-222ENST00000641587 SNX2O60749 519 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 DNAJC6O75061 913 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 ZSCAN5DPP0CG00 497 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 ACP5P13686 325 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 ETS1P14921 441 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 STIP1P31948 543 aaKnown RBP9.88□□□□□ -0.83
PHGDH-222ENST00000641587 DLSTP36957 453 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 CD97P48960 835 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 GUCY2DQ02846 1103 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 PTSQ03393 145 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 DPTQ07507 201 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 GPS1Q13098 491 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 PTK6Q13882 451 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 ERV3-1Q14264 604 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 IHHQ14623 411 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 ERCC6LQ2NKX8 1250 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 ARMC12Q5T9G4 340 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 WDR74Q6RFH5 385 aaPredicted RBP9.88□□□□□ -0.83
PHGDH-222ENST00000641587 USP45Q70EL2 814 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 CHST15Q7LFX5 561 aaPredicted RBP9.88□□□□□ -0.83
PHGDH-222ENST00000641587 BBS5Q8N3I7 341 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 MYRIPQ8NFW9 859 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 CCDC110Q8TBZ0 833 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 CCHCR1Q8TD31 782 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 SLCO2A1Q92959 643 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 COX14Q96I36 57 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 ZNF599Q96NL3 588 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 TSGA13Q96PP4 275 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 RIOK2Q9BVS4 552 aaKnown RBP9.88□□□□□ -0.83
PHGDH-222ENST00000641587 PCDH9Q9HC56 1237 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 LRRC4CQ9HCJ2 640 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 ARFGAP3Q9NP61 516 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 NT5MQ9NPB1 228 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 FBXO8Q9NRD0 319 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 KCTD5Q9NXV2 234 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 ZNHIT2Q9UHR6 403 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 CROTQ9UKG9 612 aa9.88□□□□□ -0.83
PHGDH-222ENST00000641587 A0A1W2PQ67 120 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 ESYT3A0FGR9 886 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 A6NCN8 305 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 MATN3O15232 486 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 FZD6O60353 706 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 DNAJB5O75953 348 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 JCHAINP01591 159 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 GNLYP22749 145 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 PTPN3P26045 913 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 RPL22P35268 128 aaKnown RBP9.87□□□□□ -0.83
PHGDH-222ENST00000641587 MMP13P45452 471 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms