RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 SPECC1L-ADORA2AF8WAN1 911 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 UBXN8O00124 270 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 ZNF195O14628 629 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 FFAR2O15552 330 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 DIAPH2O60879 1101 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 KATNA1O75449 491 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 HIST1H2AGP0C0S8 130 aaPredicted RBP9.58□□□□□ -0.88
PHGDH-215ENST00000641371 C6P13671 934 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 HLA-EP13747 358 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 MTHFD2P13995 350 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 HIST1H2ADP20671 130 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 AOAHP28039 575 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 PTPN4P29074 926 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 CTHP32929 405 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 ETV3P41162 512 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 PRLHRP49683 370 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 GALK1P51570 392 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 PTPRRQ15256 657 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 CST6Q15828 149 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 TTC31Q49AM3 519 aaPredicted RBP9.58□□□□□ -0.88
PHGDH-215ENST00000641371 BCL7AQ4VC05 210 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 UNC50Q53HI1 259 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 CES4AQ5XG92 561 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 KIAA1161Q6NSJ0 714 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 CHRDL2Q6WN34 429 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 KBTBD6Q86V97 674 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 MMAAQ8IVH4 418 aaKnown RBP9.58□□□□□ -0.88
PHGDH-215ENST00000641371 LSMEM2Q8N112 164 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 SPATA6LQ8N4H0 392 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 CEP70Q8NHQ1 597 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 GIMAP7Q8NHV1 300 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 UBTD2Q8WUN7 234 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 GLMNQ92990 594 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 SGF29Q96ES7 293 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 THOC1Q96FV9 657 aaKnown RBP9.58□□□□□ -0.88
PHGDH-215ENST00000641371 MAELQ96JY0 434 aaKnown RBP9.58□□□□□ -0.88
PHGDH-215ENST00000641371 HIST1H2AHQ96KK5 128 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 FOPNLQ96NB1 174 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 HIST1H2AJQ99878 128 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 H2AFJQ9BTM1 129 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 RIOK2Q9BVS4 552 aaKnown RBP9.58□□□□□ -0.88
PHGDH-215ENST00000641371 BOCQ9BWV1 1114 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 LRMDAQ9H2I8 198 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 MMADHCQ9H3L0 296 aaPredicted RBP9.58□□□□□ -0.88
PHGDH-215ENST00000641371 CYP4F12Q9HCS2 524 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 ZDHHC4Q9NPG8 344 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 PNPOQ9NVS9 261 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.58□□□□□ -0.889e-8■■■□□ 19.1
PHGDH-215ENST00000641371 SARDHQ9UL12 918 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 GPR34Q9UPC5 381 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 FADS3Q9Y5Q0 445 aa9.58□□□□□ -0.88
PHGDH-215ENST00000641371 DNMT3AQ9Y6K1 912 aaPredicted RBP9.58□□□□□ -0.88
PHGDH-215ENST00000641371 NPEPPSL1A6NEC2 478 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 A8MX80 341 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 MYO1CO00159 1063 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 LIN7AO14910 233 aaPredicted RBP9.57□□□□□ -0.88
PHGDH-215ENST00000641371 HGSO14964 777 aaPredicted RBP9.57□□□□□ -0.88
PHGDH-215ENST00000641371 CRCPO75575 148 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 TM7SF2O76062 418 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 RECQL5O94762 991 aaPredicted RBP9.57□□□□□ -0.88
PHGDH-215ENST00000641371 OTCP00480 354 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 DNTTP04053 509 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 CHRNGP07510 517 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 ANXA5P08758 320 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 ESRRAP11474 423 aaPredicted RBP9.57□□□□□ -0.88
PHGDH-215ENST00000641371 MPSTP25325 297 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 EEF1DP29692 281 aaKnown RBP9.57□□□□□ -0.88
PHGDH-215ENST00000641371 GMPRP36959 345 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 P2RY2P41231 377 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 KIR2DL1P43626 348 aaPredicted RBP9.57□□□□□ -0.88
PHGDH-215ENST00000641371 GPR1P46091 355 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 PSMD8P48556 350 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 NCALDP61601 193 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 CLCQ05315 142 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 DLX2Q07687 328 aaPredicted RBP9.57□□□□□ -0.88
PHGDH-215ENST00000641371 MAPRE2Q15555 327 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 MAP7D1Q3KQU3 841 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 PUS10Q3MIT2 529 aaKnown RBP9.57□□□□□ -0.88
PHGDH-215ENST00000641371 DNAL1Q4LDG9 190 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 TMEM196Q5HYL7 178 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 HABP4Q5JVS0 413 aaKnown RBP9.57□□□□□ -0.88
PHGDH-215ENST00000641371 EOGTQ5NDL2 527 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 SBSNQ6UWP8 590 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 ADAMTSL4Q6UY14 1074 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 RNF165Q6ZSG1 346 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 ZNF483Q8TF39 744 aaPredicted RBP9.57□□□□□ -0.88
PHGDH-215ENST00000641371 ATL1Q8WXF7 558 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 ASB12Q8WXK4 309 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 FAM131CQ96AQ9 280 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 TMEM159Q96B96 161 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 LINC00615Q96LM1 132 aaPredicted RBP9.57□□□□□ -0.88
PHGDH-215ENST00000641371 ZNF382Q96SR6 550 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 CCM2Q9BSQ5 444 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 PHF7Q9BWX1 381 aaPredicted RBP9.57□□□□□ -0.88
PHGDH-215ENST00000641371 SLC12A9Q9BXP2 914 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 NMUR2Q9GZQ4 415 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 C1orf21Q9H246 121 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 MEAF6Q9HAF1 191 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 PARVBQ9HBI1 364 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 TRIM39Q9HCM9 518 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms