RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 LOC100130705A0A1B0GUX0 176 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 TTC34A8MYJ7 566 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 CHRNA1P02708 482 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 HSD17B1P14061 328 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 WEE1P30291 646 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 INCA1Q0VD86 236 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 ILF2Q12905 390 aaKnown RBP13.6□□□□□ -0.23
SCARB2-227ENST00000640957 BNIP2Q12982 314 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 GPRIN1Q7Z2K8 1008 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 GALNT13Q8IUC8 556 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 SLC38A6Q8IZM9 456 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 BEST2Q8NFU1 509 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 MUL1Q969V5 352 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 DUS3LQ96G46 650 aaKnown RBP13.6□□□□□ -0.23
SCARB2-227ENST00000640957 C12orf42Q96LP6 360 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 NEDD4LQ96PU5 975 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 C11orf84Q9BUA3 381 aaPredicted RBP13.6□□□□□ -0.23
SCARB2-227ENST00000640957 IRF2BPLQ9H1B7 796 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 RMND5AQ9H871 391 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 PARVBQ9HBI1 364 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 PDZK1P1A8MUH7 402 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 DFNA5O60443 496 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 RECQL4O94761 1208 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 TOMM70O94826 608 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 ALOX5P09917 674 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 MVKQ03426 396 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 BLOC1S3Q6QNY0 202 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 ELMOD1Q8N336 334 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 MINDY1Q8N5J2 469 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 HASPINQ8TF76 798 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 CGREF1Q99674 301 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 KCNS3Q9BQ31 491 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 SARS2Q9NP81 518 aaKnown RBP13.6□□□□□ -0.23
SCARB2-227ENST00000640957 RBM22Q9NW64 420 aaKnown RBP eCLIP13.6□□□□□ -0.23
SCARB2-227ENST00000640957 GALPQ9UBC7 116 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 ABCD2Q9UBJ2 740 aa13.6□□□□□ -0.23
SCARB2-227ENST00000640957 IGKV6D-21A0A0A0MT36 114 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 TRIM64BA6NI03 449 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 C22orf31O95567 290 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 RBBP7Q16576 425 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 UGP2Q16851 508 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 SMU1Q2TAY7 513 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 OR8H2Q8N162 312 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 OR6J1Q8NGC5 347 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 DNAJB3Q8WWF6 145 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 DEPDC7Q96QD5 511 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 ADGRE2Q9UHX3 823 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 ZNF112Q9UJU3 913 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 PRRC2BQ5JSZ5 2229 aaKnown RBP13.59□□□□□ -0.23
SCARB2-227ENST00000640957 M0R129 80 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 FCGR1AP12314 374 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 IMPDH1P20839 514 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 NUDT6P53370 316 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 GRIK4Q16099 956 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 CLPPQ16740 277 aaPredicted RBP13.59□□□□□ -0.23
SCARB2-227ENST00000640957 C18orf21Q32NC0 220 aaPredicted RBP13.59□□□□□ -0.23
SCARB2-227ENST00000640957 ATP6AP1LQ52LC2 224 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 CEP78Q5JTW2 689 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 NEK5Q6P3R8 708 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 GCNT7Q6ZNI0 430 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 PROX1Q92786 737 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 Q96MT0 163 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 SMIM14Q96QK8 99 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 KIFC1Q9BW19 673 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 DCSTAMPQ9H295 470 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 RNF39Q9H2S5 420 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 IKZF5Q9H5V7 419 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.59□□□□□ -0.23
SCARB2-227ENST00000640957 ASB1Q9Y576 335 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 EFCAB9A8MZ26 197 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 C1QCP02747 245 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.59□□□□□ -0.23
SCARB2-227ENST00000640957 TFAP2DQ7Z6R9 452 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 OR2T11Q8NH01 316 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 FAM162AQ96A26 154 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 CLSTN3Q9BQT9 956 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 RGS18Q9NS28 235 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 PCDHB14Q9Y5E9 798 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 ARID2Q68CP9 1835 aa13.59□□□□□ -0.23
SCARB2-227ENST00000640957 QSER1Q2KHR3 1735 aa13.58□□□□□ -0.23
SCARB2-227ENST00000640957 A0A096LPI6 279 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 GOLGA8CPA6NN73 597 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 SLC22A3O75751 556 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 C21orf33P30042 268 aaPredicted RBP13.58□□□□□ -0.24
SCARB2-227ENST00000640957 POLR2JP52435 117 aaKnown RBP13.58□□□□□ -0.24
SCARB2-227ENST00000640957 BEX3Q00994 111 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 CLCA4Q14CN2 919 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 PRSS36Q5K4E3 855 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 VARS2Q5ST30 1063 aaKnown RBP13.58□□□□□ -0.24
SCARB2-227ENST00000640957 C9orf131Q5VYM1 1079 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 GDPD3Q7L5L3 318 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 FAM126BQ8IXS8 530 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 GPC2Q8N158 579 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 METTL4Q8N3J2 472 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 WNT8BQ93098 351 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 ASB7Q9H672 318 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 GMIPQ9P107 970 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 POLR2AP24928 1970 aaKnown RBP13.58□□□□□ -0.24
SCARB2-227ENST00000640957 MAGEB16A2A368 324 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 SMIM30A4D0T7 59 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms