RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 GAD1Q99259 594 aa4.97□□□□□ -1.61
HNRNPU-230ENST00000640657 CINPQ9BW66 212 aaPredicted RBP4.97□□□□□ -1.61
HNRNPU-230ENST00000640657 ROGDIQ9GZN7 287 aa4.97□□□□□ -1.61
HNRNPU-230ENST00000640657 POLR1EQ9GZS1 481 aaKnown RBP4.97□□□□□ -1.61
HNRNPU-230ENST00000640657 MFSD1Q9H3U5 465 aa4.97□□□□□ -1.61
HNRNPU-230ENST00000640657 KRCC1Q9NPI7 259 aaPredicted RBP4.97□□□□□ -1.61
HNRNPU-230ENST00000640657 PCDHB8Q9UN66 801 aa4.97□□□□□ -1.61
HNRNPU-230ENST00000640657 SNX8Q9Y5X2 465 aa4.97□□□□□ -1.61
HNRNPU-230ENST00000640657 PSAT1Q9Y617 370 aa4.97□□□□□ -1.61
HNRNPU-230ENST00000640657 ZNF541Q9H0D2 1346 aa4.97□□□□□ -1.61
HNRNPU-230ENST00000640657 H7C0S8 307 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 DLGAP1O14490 977 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 DYNC1LI2O43237 492 aaPredicted RBP4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 STX11O75558 287 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 CNTN5O94779 1100 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 SORBS2O94875 1100 aaKnown RBP4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 SNX4O95219 450 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 AHSGP02765 367 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 NR2F6P10588 404 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 MTHFD1P11586 935 aaKnown RBP4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 ODC1P11926 461 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 NR4A1P22736 598 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 CRHBPP24387 322 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 ELK4P28324 431 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 GMPRP36959 345 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 MAGEA12P43365 314 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 GMPSP49915 693 aaPredicted RBP4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 CDH13P55290 713 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 DPY19L1Q2PZI1 675 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 ANKDD1AQ495B1 522 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 SGO1Q5FBB7 561 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 TJAP1Q5JTD0 557 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 ZNF678Q5SXM1 525 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 ATG9BQ674R7 924 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 OR2T5Q6IEZ7 315 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 CDC73Q6P1J9 531 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 NAPRTQ6XQN6 538 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 GDPGP1Q6ZNW5 385 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 RALGPS2Q86X27 583 aaPredicted RBP4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 RASAL3Q86YV0 1011 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 OR2T29Q8NH02 315 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 OR4L1Q8NH43 312 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 RHEBL1Q8TAI7 183 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 KCNN1Q92952 543 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 PEX13Q92968 403 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 PYURFQ96I23 114 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 CEP295NLQ96MC4 621 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 ZNF641Q96N77 438 aaPredicted RBP4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 TEFMQ96QE5 360 aaKnown RBP4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 ACAT2Q9BWD1 397 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 FZD8Q9H461 694 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 ANKRA2Q9H9E1 313 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 PAK6Q9NQU5 681 aaPredicted RBP4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 FBXO8Q9NRD0 319 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 LATS2Q9NRM7 1088 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 C1orf109Q9NX04 203 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 CD300AQ9UGN4 299 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 PCDHGB3Q9Y5G1 929 aa4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 BAZ2AQ9UIF9 1905 aaKnown RBP4.96□□□□□ -1.61
HNRNPU-230ENST00000640657 TCRBV5S1A1TA0A578 114 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 AGAP5A6NIR3 686 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 YDJCA8MPS7 323 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 B8ZZF3 427 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 MSI1O43347 362 aaKnown RBP4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 EFCAB14O75071 495 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 CCNDBP1O95273 360 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 MMP10P09238 476 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 ITGAMP11215 1152 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 NCF1P14598 390 aaPredicted RBP4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 ITGALP20701 1170 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 RPS12P25398 132 aaKnown RBP4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 IDH2P48735 452 aaKnown RBP4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 SLC9A3P48764 834 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 CLCN3P51790 818 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 MAPK12P53778 367 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 HMGCS2P54868 508 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 PLIN5Q00G26 463 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 SCRN3Q0VDG4 424 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 CNTN1Q12860 1018 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 KCNAB2Q13303 367 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 KEAP1Q14145 624 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 CLCA4Q14CN2 919 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 AP5B1Q2VPB7 878 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 TECRLQ5HYJ1 363 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 KIAA1614Q5VZ46 1190 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 NANOGP8Q6NSW7 305 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 DUS1LQ6P1R4 473 aaKnown RBP4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 CYP4V2Q6ZWL3 525 aaPredicted RBP4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 CLEC14AQ86T13 490 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 TOR1AIP2Q8NFQ8 470 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 JPH3Q8WXH2 748 aaPredicted RBP4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 MAELQ96JY0 434 aaKnown RBP4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 FAM193BQ96PV7 902 aaPredicted RBP4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 PPP1R16BQ96T49 567 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 NEURL2Q9BR09 285 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 FDXACB1Q9BRP7 624 aaPredicted RBP4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 ULBP1Q9BZM6 244 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 AP5M1Q9H0R1 490 aa4.96□□□□□ -1.62
HNRNPU-230ENST00000640657 MED28Q9H204 178 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms