RNA–Protein interactions for RNA: ENST00000637535.1

CACNB4-256, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5

Gene CACNB4, Length 1,731 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-256	ENST00000637535	PLA2G4B	P0C869	781 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	GFAP	P14136	432 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	HMGA1	P17096	107 aa	Known RBP	6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	MYF6	P23409	242 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	GJA4	P35212	333 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	HSD17B2	P37059	387 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	NR2C2	P49116	596 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	LIG4	P49917	911 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	LIMK1	P53667	647 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	MLLT10	P55197	1068 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	WNT7B	P56706	349 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	JAM2	P57087	298 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	EIF3E	P60228	445 aa	Known RBP	6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	GPR85	P60893	370 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	BFSP1	Q12934	665 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	PMS2P3	Q13401	168 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	C4orf46	Q504U0	113 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	C2orf27A	Q580R0	203 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	FSCB	Q5H9T9	825 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	IRAK1BP1	Q5VVH5	260 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	C9orf57	Q5W0N0	161 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	TFAP2D	Q7Z6R9	452 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	SLC22A16	Q86VW1	577 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	UNC45B	Q8IWX7	931 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	LILRA2	Q8N149	483 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	DEPDC4	Q8N2C3	294 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	DEFB119	Q8N690	84 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	C7orf57	Q8NEG2	295 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	DEFB124	Q8NES8	71 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	OR6F1	Q8NGZ6	308 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	OLIG1	Q8TAK6	271 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	MZB1	Q8WU39	189 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	PMM1	Q92871	262 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	CMTM5	Q96DZ9	223 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	NRBF2	Q96F24	287 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	TNIP3	Q96KP6	325 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	BCL7B	Q9BQE9	202 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	TMEM246	Q9BRR3	403 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	NTPCR	Q9BSD7	190 aa	Known RBP	6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	MSTO1	Q9BUK6	570 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	SCNM1	Q9BWG6	230 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	SLC13A1	Q9BZW2	595 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	RPF1	Q9H9Y2	349 aa	Known RBP	6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	OSGEP	Q9NPF4	335 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	DTL	Q9NZJ0	730 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	NXF1	Q9UBU9	619 aa	Known RBP	6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	DNMT3L	Q9UJW3	386 aa		6.94	□□□□□ -1.3
CACNB4-256	ENST00000637535	KIAA1549L	Q6ZVL6	1849 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	C7orf72	A4D263	438 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	C2orf78	A6NCI8	922 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	C12orf71	A8MTZ7	269 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535		K7ENM7	598 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	PIR	O00625	290 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	TOR1A	O14656	332 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	TRDMT1	O14717	391 aa	Known RBP	6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	CCNK	O75909	580 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	OR7A10	O76100	309 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	ALDH1A2	O94788	518 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	NDST3	O95803	873 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	GSN	P06396	782 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	HAPLN1	P10915	354 aa	Predicted RBP	6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	DBT	P11182	482 aa	Known RBP	6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	MTHFD1	P11586	935 aa	Known RBP	6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	ODC1	P11926	461 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	HNRNPL	P14866	589 aa	Known RBP eCLIP	6.93	□□□□□ -1.3	5e-14	■■□□□ 14.1
CACNB4-256	ENST00000637535	UCHL3	P15374	230 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	TYMP	P19971	482 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	CYP2F1	P24903	491 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	PTX3	P26022	381 aa	Predicted RBP	6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	EEF1D	P29692	281 aa	Known RBP	6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	L1CAM	P32004	1257 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	GP5	P40197	560 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	SLC19A1	P41440	591 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	DHPS	P49366	369 aa	Predicted RBP	6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	NDST1	P52848	882 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	SLC12A3	P55017	1021 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	CDH15	P55291	814 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	GPLD1	P80108	840 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	MRPS15	P82914	257 aa	Known RBP	6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	SHC2	P98077	582 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	OTUD4	Q01804	1114 aa	Known RBP	6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	SCRN3	Q0VDG4	424 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	MESP2	Q0VG99	397 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	ILF2	Q12905	390 aa	Known RBP	6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	BAMBI	Q13145	260 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	KRR1	Q13601	381 aa	Known RBP	6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	DNASE1L3	Q13609	305 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	DMC1	Q14565	340 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	VEPH1	Q14D04	833 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	RALGPS1	Q5JS13	557 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	BRMS1L	Q5PSV4	323 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	METTL11B	Q5VVY1	283 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	AGAP6	Q5VW22	663 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	ZPBP2	Q6X784	338 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	LIAT1	Q6ZQX7	453 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	BTLA	Q7Z6A9	289 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	GALNT12	Q8IXK2	581 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	SYNPO	Q8N3V7	929 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	MYCT1	Q8N699	235 aa		6.93	□□□□□ -1.3
CACNB4-256	ENST00000637535	PACRGL	Q8N7B6	248 aa		6.93	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms