RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 ARNTLO00327 626 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 GPR171O14626 319 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 MAP2K7O14733 419 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 HS3ST1O14792 307 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 ADAMDEC1O15204 470 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 ADCY6O43306 1168 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 KCNAB3O43448 404 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 SPRY1O43609 319 aaPredicted RBP2.98□□□□□ -1.93
VIM-210ENST00000637053 FOXS1O43638 330 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 TULP3O75386 442 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 SEC14L2O76054 403 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 PDE5AO76074 875 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 OR6B1O95007 311 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 SEMA3DO95025 777 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 GLP2RO95838 553 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 LDLRP01130 860 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 PRLP01236 227 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 GBAP04062 536 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 HMGN1P05114 100 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 SERPING1P05155 500 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 IQCF3P0C7M6 154 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 FAM58BPP0C7Q3 252 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 FAM90A15PP0C7V4 464 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 FAM90A14PP0C7W9 464 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 CALCBP10092 127 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 LCP1P13796 627 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 GABRB1P18505 474 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 DRD5P21918 477 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 TCEA1P23193 301 aaKnown RBP2.98□□□□□ -1.93
VIM-210ENST00000637053 TUBG1P23258 451 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 PSMA2P25787 234 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 KLRK1P26718 216 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 SERPINA4P29622 427 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 LCN1P31025 176 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 HOXA13P31271 388 aaPredicted RBP2.98□□□□□ -1.93
VIM-210ENST00000637053 SHMT1P34896 483 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 RORAP35398 523 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 FRKP42685 505 aaPredicted RBP2.98□□□□□ -1.93
VIM-210ENST00000637053 SYKP43405 635 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 KCNJ5P48544 419 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 CCT3P49368 545 aaKnown RBP2.98□□□□□ -1.93
VIM-210ENST00000637053 CCR4P51679 360 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 AIF1P55008 147 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 MFAP4P55083 255 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 UCP2P55851 309 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 SESN2P58004 480 aaPredicted RBP2.98□□□□□ -1.93
VIM-210ENST00000637053 SKP1P63208 163 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 SCRN1Q12765 414 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 CDC20Q12834 499 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 SPP2Q13103 211 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 PDZK1IP1Q13113 114 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 SLAQ13239 276 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 TUSC3Q13454 348 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 PGM5Q15124 567 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 TXNRD1Q16881 649 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 KIZQ2M2Z5 673 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 SLC36A3Q495N2 470 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 NRN1LQ496H8 165 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 PLEKHO1Q53GL0 409 aaPredicted RBP2.98□□□□□ -1.93
VIM-210ENST00000637053 FAM76BQ5HYJ3 339 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 KHDC1LQ5JSQ8 128 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 ZNF484Q5JVG2 852 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 LRRC38Q5VT99 294 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 ZDHHC20Q5W0Z9 365 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 SPECC1LQ69YQ0 1117 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 ARMC6Q6NXE6 501 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 TTC27Q6P3X3 843 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 SARM1Q6SZW1 724 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 ARSKQ6UWY0 536 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 WDR88Q6ZMY6 472 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 ETV3LQ6ZN32 361 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 COLCA1Q6ZS62 124 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 CYP4V2Q6ZWL3 525 aaPredicted RBP2.98□□□□□ -1.93
VIM-210ENST00000637053 TAS1R1Q7RTX1 841 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 CAMKMTQ7Z624 323 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 SLC51BQ86UW2 128 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 ZNF410Q86VK4 478 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 ZC3H18Q86VM9 953 aaKnown RBP2.98□□□□□ -1.93
VIM-210ENST00000637053 CCDC25Q86WR0 208 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 SERPINA12Q8IW75 414 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 NELFCDQ8IXH7 590 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 GPR65Q8IYL9 337 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 UNC5BQ8IZJ1 945 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 GPR137CQ8N3F9 429 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 LIX1Q8N485 282 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 ZNF366Q8N895 744 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 ZNF781Q8N8C0 355 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 RASGEF1AQ8N9B8 481 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 TC2NQ8N9U0 490 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 L3MBTL4Q8NA19 623 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 C11orf65Q8NCR3 313 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 OR6B3Q8NGW1 331 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 WDR48Q8TAF3 677 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 UBA3Q8TBC4 463 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 RNASE8Q8TDE3 154 aaKnown RBP2.98□□□□□ -1.93
VIM-210ENST00000637053 ATP8B4Q8TF62 1192 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 DYDC1Q8WWB3 177 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 SELENOMQ8WWX9 145 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 EXTL1Q92935 676 aa2.98□□□□□ -1.93
VIM-210ENST00000637053 ZG16BQ96DA0 208 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms