RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 KMOO15229 486 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 NDUFS3O75489 264 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 CER1O95813 267 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 SYPP08247 313 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 OR56A5P0C7T3 313 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 ZNF883P0CG24 379 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 THEGLP0DJG4 465 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 MYBL2P10244 700 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 ATP1B2P14415 290 aaPredicted RBP6.63□□□□□ -1.35
UPF3B-205ENST00000636792 SLC2A4P14672 509 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 NME1P15531 152 aaKnown RBP6.63□□□□□ -1.35
UPF3B-205ENST00000636792 MSH3P20585 1137 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 ATP5DP30049 168 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 SSTR1P30872 391 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 MAT2AP31153 395 aaKnown RBP6.63□□□□□ -1.35
UPF3B-205ENST00000636792 AKT1P31749 480 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 SLC1A2P43004 574 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 RXRGP48443 463 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 ARRB1P49407 418 aaPredicted RBP6.63□□□□□ -1.35
UPF3B-205ENST00000636792 LIMK2P53671 638 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 C21orf59P57076 290 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 NXPH1P58417 271 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 GPX6P59796 221 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 HNRNPKP61978 463 aaKnown RBP eCLIP6.63□□□□□ -1.35
UPF3B-205ENST00000636792 DMPKQ09013 629 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 CHRNA6Q15825 494 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 GPRC6AQ5T6X5 926 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 TEDDM1Q5T9Z0 273 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 GRTP1Q5TC63 336 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 LGSNQ5TDP6 509 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 SAMD5Q5TGI4 173 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 ALS2CLQ60I27 953 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 FAM45BPQ6NSW5 357 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 PSAPL1Q6NUJ1 521 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 PTAR1Q7Z6K3 402 aaPredicted RBP6.63□□□□□ -1.35
UPF3B-205ENST00000636792 SYT9Q86SS6 491 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 LRRTM4Q86VH4 590 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 LCA5Q86VQ0 697 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 SERPINA9Q86WD7 417 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 TDRPQ86YL5 185 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 ANKMY2Q8IV38 441 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 IGDCC3Q8IVU1 814 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 CUL9Q8IWT3 2517 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 TMEFF1Q8IYR6 380 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 FSTL5Q8N475 847 aaPredicted RBP6.63□□□□□ -1.35
UPF3B-205ENST00000636792 PRSS33Q8NF86 280 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 OR13H1Q8NG92 308 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 FAM45AQ8TCE6 357 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 HM13Q8TCT9 377 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 LPGAT1Q92604 370 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 FUBP1Q96AE4 644 aaKnown RBP6.63□□□□□ -1.35
UPF3B-205ENST00000636792 MTBPQ96DY7 904 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 ERLEC1Q96DZ1 483 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 CFAP36Q96G28 342 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 BMFQ96LC9 184 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 C9orf72Q96LT7 481 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 FCRL3Q96P31 734 aaPredicted RBP6.63□□□□□ -1.35
UPF3B-205ENST00000636792 SMIM14Q96QK8 99 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 TMEM109Q9BVC6 243 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 NUSAP1Q9BXS6 441 aaKnown RBP6.63□□□□□ -1.35
UPF3B-205ENST00000636792 ROPN1BQ9BZX4 212 aaPredicted RBP6.63□□□□□ -1.35
UPF3B-205ENST00000636792 CLPBQ9H078 707 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 RHOJQ9H4E5 214 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 EBF2Q9HAK2 575 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 ROPN1Q9HAT0 212 aaPredicted RBP6.63□□□□□ -1.35
UPF3B-205ENST00000636792 CAPN10Q9HC96 672 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 BPIFA1Q9NP55 256 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 ARFGAP3Q9NP61 516 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 MBNL1Q9NR56 388 aaKnown RBP6.63□□□□□ -1.35
UPF3B-205ENST00000636792 LATS2Q9NRM7 1088 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.63□□□□□ -1.35
UPF3B-205ENST00000636792 KLQ9UEF7 1012 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 SLC2A6Q9UGQ3 507 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 SLC24A2Q9UI40 661 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 FBXO5Q9UKT4 447 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 KCTD3Q9Y597 815 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 IKBKGQ9Y6K9 419 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 EXOC1LA0A1B0GW35 172 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 POM121BA6NF01 834 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 C9orf172C9J069 976 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 FAM229AH3BQW9 127 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 M0R082 166 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 TLR4O00206 839 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 LIN7AO14910 233 aaPredicted RBP6.62□□□□□ -1.35
UPF3B-205ENST00000636792 RAD51BO15315 384 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 BUD23O43709 281 aaKnown RBP6.62□□□□□ -1.35
UPF3B-205ENST00000636792 NUAK1O60285 661 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 CDH16O75309 829 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 BANF1O75531 89 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 KRT38O76015 456 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 CDK14O94921 469 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 LMNAP02545 664 aaKnown RBP6.62□□□□□ -1.35
UPF3B-205ENST00000636792 C1QAP02745 245 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 CSF2P04141 144 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 INHBAP08476 426 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 FAM153BP0C7A2 387 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 ENO3P13929 434 aaPredicted RBP6.62□□□□□ -1.35
UPF3B-205ENST00000636792 H2AFXP16104 143 aaPredicted RBP6.62□□□□□ -1.35
UPF3B-205ENST00000636792 ITPKAP23677 461 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 SPRP35270 261 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms