RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 ARHGAP40Q5TG30 622 aa17.67■□□□□ 0.42
CACNA1A-227ENST00000636549 DAGLBQ8NCG7 672 aa17.67■□□□□ 0.42
CACNA1A-227ENST00000636549 C1orf216Q8TAB5 229 aa17.67■□□□□ 0.42
CACNA1A-227ENST00000636549 TSPAN4O14817 238 aa17.67■□□□□ 0.42
CACNA1A-227ENST00000636549 CLPXO76031 633 aa17.67■□□□□ 0.42
CACNA1A-227ENST00000636549 PTPN2P17706 415 aa17.67■□□□□ 0.42
CACNA1A-227ENST00000636549 CPN2P22792 545 aa17.67■□□□□ 0.42
CACNA1A-227ENST00000636549 RFX5P48382 616 aaPredicted RBP17.67■□□□□ 0.42
CACNA1A-227ENST00000636549 AP1S2P56377 157 aa17.67■□□□□ 0.42
CACNA1A-227ENST00000636549 KLHL26Q53HC5 615 aa17.67■□□□□ 0.42
CACNA1A-227ENST00000636549 GPAT4Q86UL3 456 aa17.67■□□□□ 0.42
CACNA1A-227ENST00000636549 DGAT2Q96PD7 388 aa17.67■□□□□ 0.42
CACNA1A-227ENST00000636549 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.67■□□□□ 0.42
CACNA1A-227ENST00000636549 E7EQ34 232 aa17.67■□□□□ 0.42
CACNA1A-227ENST00000636549 CFL1P23528 166 aaKnown RBP17.67■□□□□ 0.42
CACNA1A-227ENST00000636549 SEMA3AQ14563 771 aa17.67■□□□□ 0.42
CACNA1A-227ENST00000636549 CEP97Q8IW35 865 aa17.67■□□□□ 0.42
CACNA1A-227ENST00000636549 PLEKHA6Q9Y2H5 1048 aa17.67■□□□□ 0.42
CACNA1A-227ENST00000636549 TESMINQ9Y4I5 508 aa17.67■□□□□ 0.42
CACNA1A-227ENST00000636549 GRIN2DO15399 1336 aa17.67■□□□□ 0.42
CACNA1A-227ENST00000636549 BTBD19C9JJ37 291 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 PDPK1O15530 556 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 TM7SF2O76062 418 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 CYP17A1P05093 508 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 CMTR2Q8IYT2 770 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 IL31RAQ8NI17 732 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 CITED4Q96RK1 184 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 ARHGEF4Q9NR80 690 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 FTSJ1Q9UET6 329 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 MYCLP1P12525 358 aaPredicted RBP17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 FSHRP23945 695 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 KLF1Q13351 362 aaPredicted RBP17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 ASB12Q8WXK4 309 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 GDAP2Q9NXN4 497 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 SLC24A2Q9UI40 661 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 SAMD4AQ9UPU9 718 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 CD163L1Q9NR16 1453 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 C8orf89P0DMQ9 161 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 PRKAR1AP10644 381 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 ASMTP46597 345 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 NCBP2P52298 156 aaKnown RBP eCLIP17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 PDGFRLQ15198 375 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 SPHKAPQ2M3C7 1700 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 TSGA10IPQ3SY00 556 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 ANXA8L1Q5VT79 327 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 METTL7AQ9H8H3 244 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 RIIAD1A6NNX1 92 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 PEX12O00623 359 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 CPNE3O75131 537 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 DSG2Q14126 1118 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 SIM2Q14190 667 aaPredicted RBP17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 TREML1Q86YW5 311 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 OR5AK3PQ8NH89 298 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 UPF1Q92900 1129 aaKnown RBP eCLIP17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 MR1Q95460 341 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 ZHX1-C8orf76Q96EF9 292 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 ZNF570Q96NI8 536 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 LACRTQ9GZZ8 138 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 CAMSAP1Q5T5Y3 1602 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 SLC15A5A6NIM6 579 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 OR5T2Q8NGG2 359 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 SLC25A23Q9BV35 468 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 IFT27Q9BW83 186 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 ARL5AQ9Y689 179 aa17.66■□□□□ 0.42
CACNA1A-227ENST00000636549 C8AP07357 584 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 COX4I1P13073 169 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 CD247P20963 164 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 HKDC1Q2TB90 917 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 SCGB2B2Q4G0G5 96 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 OGFRL1Q5TC84 451 aaPredicted RBP17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 EZH1Q92800 747 aaPredicted RBP17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 BORCS8Q96FH0 119 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 ASB2Q96Q27 587 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 ZDHHC4Q9NPG8 344 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 LEF1Q9UJU2 399 aaPredicted RBP17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 KCNS2Q9ULS6 477 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 CORO2BQ9UQ03 480 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 TET3O43151 1660 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 LOC110117498-PIK3R3F6TDL0 507 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 S100A6P06703 90 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 ACTR3P61158 418 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 MPP1Q00013 466 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 PRKCDQ05655 676 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 CDK18Q07002 472 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 ECHDC2Q86YB7 292 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 OR51B6Q9H340 312 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 TMEM98Q9Y2Y6 226 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 H7C0S8 307 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 PRAMEF1O95521 474 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 C1QTNF8P60827 252 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 ATP13A5Q4VNC0 1218 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 IDNKQ5T6J7 187 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 A0A1W2PPL8 197 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 PLATP00750 562 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 AZGP1P25311 298 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 ACTR1BP42025 376 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 GRK6P43250 576 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 ACTR1AP61163 376 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 MRPS5P82675 430 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 CDK16Q00536 496 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms