RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 DNAJC6O75061 913 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 NDUFS3O75489 264 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 RFPL3O75679 317 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 FUCA1P04066 466 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 MAGEA4P43358 317 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 B4GALNT1Q00973 533 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 ILF3Q12906 894 aaKnown RBP eCLIP14.5□□□□□ -0.09
PNKP-221ENST00000627317 ILKQ13418 452 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 C1orf61Q13536 156 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 SEMA3AQ14563 771 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 ST3GAL2Q16842 350 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 INSCQ1MX18 579 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 PYCR3Q53H96 274 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 RNF187Q5TA31 235 aaPredicted RBP14.5□□□□□ -0.09
PNKP-221ENST00000627317 CAPN12Q6ZSI9 719 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 MARCH9Q86YJ5 346 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 PALM2Q8IXS6 379 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 RASGEF1AQ8N9B8 481 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 GSDMBQ8TAX9 411 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 CERS2Q96G23 380 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 ZNF514Q96K75 400 aaPredicted RBP14.5□□□□□ -0.09
PNKP-221ENST00000627317 BOCQ9BWV1 1114 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 TMEM168Q9H0V1 697 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 PPANQ9NQ55 473 aaKnown RBP14.5□□□□□ -0.09
PNKP-221ENST00000627317 TRNAU1APQ9NX07 287 aaKnown RBP14.5□□□□□ -0.09
PNKP-221ENST00000627317 NFU1Q9UMS0 254 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 DOLKQ9UPQ8 538 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 BPTFQ12830 3046 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 CELSR3Q9NYQ7 3312 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 NEMP2A6NFY4 417 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 F8W8V4 182 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 CHUKO15111 745 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 KMOO15229 486 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 ERVK-10P10266 1014 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 ALPPL2P10696 532 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 CDK4P11802 303 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 CKMT1AP12532 417 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 ACP5P13686 325 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 ATP1B2P14415 290 aaPredicted RBP14.49□□□□□ -0.09
PNKP-221ENST00000627317 ZNF7P17097 686 aaPredicted RBP14.49□□□□□ -0.09
PNKP-221ENST00000627317 OGNP20774 298 aaKnown RBP14.49□□□□□ -0.09
PNKP-221ENST00000627317 NSG1P42857 185 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 CTSCP53634 463 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 LRP8Q14114 963 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 PLA2G4EQ3MJ16 856 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 HSP90AA5PQ58FG0 334 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 TMEM220Q6QAJ8 160 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 PACS1Q6VY07 963 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 CHST15Q7LFX5 561 aaPredicted RBP14.49□□□□□ -0.09
PNKP-221ENST00000627317 TAF8Q7Z7C8 310 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 LDB1Q86U70 411 aaPredicted RBP14.49□□□□□ -0.09
PNKP-221ENST00000627317 GKN2Q86XP6 184 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 LMNTD2Q8IXW0 634 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 UNC5BQ8IZJ1 945 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 GPR150Q8NGU9 434 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 UBXN4Q92575 508 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 CCDC97Q96F63 343 aaPredicted RBP14.49□□□□□ -0.09
PNKP-221ENST00000627317 C9orf72Q96LT7 481 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 TCF12Q99081 682 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 GSDMCQ9BYG8 508 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 CLPBQ9H078 707 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 VPS9D1Q9Y2B5 631 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 CACNA1BQ00975 2339 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 PTPRBP23467 1997 aa14.49□□□□□ -0.09
PNKP-221ENST00000627317 UBA6A0AVT1 1052 aaPredicted RBP14.48□□□□□ -0.09
PNKP-221ENST00000627317 LMO7DNF2Z398 122 aa14.48□□□□□ -0.09
PNKP-221ENST00000627317 QSOX1O00391 747 aa14.48□□□□□ -0.09
PNKP-221ENST00000627317 AP2A2O94973 939 aa14.48□□□□□ -0.09
PNKP-221ENST00000627317 ANXA6P08133 673 aa14.48□□□□□ -0.09
PNKP-221ENST00000627317 CELA2BP08218 269 aaPredicted RBP14.48□□□□□ -0.09
PNKP-221ENST00000627317 VCLP18206 1134 aa14.48□□□□□ -0.09
PNKP-221ENST00000627317 PBLDP30039 288 aaPredicted RBP14.48□□□□□ -0.09
PNKP-221ENST00000627317 ECHS1P30084 290 aa14.48□□□□□ -0.09
PNKP-221ENST00000627317 CLDN6P56747 220 aa14.48□□□□□ -0.09
PNKP-221ENST00000627317 CTBSQ01459 385 aa14.48□□□□□ -0.09
PNKP-221ENST00000627317 FRG1Q14331 258 aaKnown RBP14.48□□□□□ -0.09
PNKP-221ENST00000627317 TYSND1Q2T9J0 566 aa14.48□□□□□ -0.09
PNKP-221ENST00000627317 BCL7AQ4VC05 210 aa14.48□□□□□ -0.09
PNKP-221ENST00000627317 CILP2Q8IUL8 1156 aa14.48□□□□□ -0.09
PNKP-221ENST00000627317 GALNT15Q8N3T1 639 aa14.48□□□□□ -0.09
PNKP-221ENST00000627317 NAT14Q8WUY8 206 aa14.48□□□□□ -0.09
PNKP-221ENST00000627317 SCG3Q8WXD2 468 aaKnown RBP14.48□□□□□ -0.09
PNKP-221ENST00000627317 SGF29Q96ES7 293 aa14.48□□□□□ -0.09
PNKP-221ENST00000627317 APOLD1Q96LR9 279 aa14.48□□□□□ -0.09
PNKP-221ENST00000627317 TIMM29Q9BSF4 260 aa14.48□□□□□ -0.09
PNKP-221ENST00000627317 OSGEPL1Q9H4B0 414 aa14.48□□□□□ -0.09
PNKP-221ENST00000627317 VPS37BQ9H9H4 285 aa14.48□□□□□ -0.09
PNKP-221ENST00000627317 PLAC1Q9HBJ0 212 aa14.48□□□□□ -0.09
PNKP-221ENST00000627317 IARS2Q9NSE4 1012 aaKnown RBP14.48□□□□□ -0.09
PNKP-221ENST00000627317 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.48□□□□□ -0.09
PNKP-221ENST00000627317 GPR34Q9UPC5 381 aa14.48□□□□□ -0.09
PNKP-221ENST00000627317 PCYT1BQ9Y5K3 369 aaPredicted RBP14.48□□□□□ -0.09
PNKP-221ENST00000627317 V9GYY5 206 aaPredicted RBP14.48□□□□□ -0.09
PNKP-221ENST00000627317 FAM149AA5PLN7 773 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 PRMT5O14744 637 aaPredicted RBP14.47□□□□□ -0.09
PNKP-221ENST00000627317 TPP1O14773 563 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 OR1I1O60431 355 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 SPAG6O75602 509 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 GSTA2P09210 222 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 OR56A5P0C7T3 313 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms