RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 ZNF333Q96JL9 665 aa4.18□□□□□ -1.74
ATRX-209ENST00000623242 PPP1R10Q96QC0 940 aaKnown RBP4.18□□□□□ -1.74
ATRX-209ENST00000623242 RHOXF2Q9BQY4 288 aa4.18□□□□□ -1.74
ATRX-209ENST00000623242 NTPCRQ9BSD7 190 aaKnown RBP4.18□□□□□ -1.74
ATRX-209ENST00000623242 MAK16Q9BXY0 300 aaKnown RBP4.18□□□□□ -1.74
ATRX-209ENST00000623242 PARD6BQ9BYG5 372 aa4.18□□□□□ -1.74
ATRX-209ENST00000623242 FRMD8Q9BZ67 464 aaPredicted RBP4.18□□□□□ -1.74
ATRX-209ENST00000623242 GPR63Q9BZJ6 419 aa4.18□□□□□ -1.74
ATRX-209ENST00000623242 FAM129AQ9BZQ8 928 aa4.18□□□□□ -1.74
ATRX-209ENST00000623242 TRIM6Q9C030 488 aaPredicted RBP4.18□□□□□ -1.74
ATRX-209ENST00000623242 TRIM2Q9C040 744 aa4.18□□□□□ -1.74
ATRX-209ENST00000623242 CTDSP1Q9GZU7 261 aa4.18□□□□□ -1.74
ATRX-209ENST00000623242 INTS2Q9H0H0 1204 aaKnown RBP4.18□□□□□ -1.74
ATRX-209ENST00000623242 FAM49AQ9H0Q0 323 aaPredicted RBP4.18□□□□□ -1.74
ATRX-209ENST00000623242 HSD3B7Q9H2F3 369 aa4.18□□□□□ -1.74
ATRX-209ENST00000623242 FAM124BQ9H5Z6 455 aaPredicted RBP4.18□□□□□ -1.74
ATRX-209ENST00000623242 VIPAS39Q9H9C1 493 aa4.18□□□□□ -1.74
ATRX-209ENST00000623242 FAM114A2Q9NRY5 505 aa4.18□□□□□ -1.74
ATRX-209ENST00000623242 AGPAT3Q9NRZ7 376 aa4.18□□□□□ -1.74
ATRX-209ENST00000623242 RAB20Q9NX57 234 aa4.18□□□□□ -1.74
ATRX-209ENST00000623242 UVRAGQ9P2Y5 699 aa4.18□□□□□ -1.74
ATRX-209ENST00000623242 HDAC6Q9UBN7 1215 aa4.18□□□□□ -1.74
ATRX-209ENST00000623242 CD207Q9UJ71 328 aa4.18□□□□□ -1.74
ATRX-209ENST00000623242 FBXO4Q9UKT5 387 aa4.18□□□□□ -1.74
ATRX-209ENST00000623242 AGO2Q9UKV8 859 aaKnown RBP4.18□□□□□ -1.74
ATRX-209ENST00000623242 HSF4Q9ULV5 492 aa4.18□□□□□ -1.74
ATRX-209ENST00000623242 SNX12Q9UMY4 172 aa4.18□□□□□ -1.74
ATRX-209ENST00000623242 GINS2Q9Y248 185 aa4.18□□□□□ -1.74
ATRX-209ENST00000623242 COX11Q9Y6N1 276 aa4.18□□□□□ -1.74
ATRX-209ENST00000623242 PARP14Q460N5 1801 aa4.18□□□□□ -1.74
ATRX-209ENST00000623242 EMSYQ7Z589 1322 aa4.18□□□□□ -1.74
ATRX-209ENST00000623242 ZNF236Q9UL36 1845 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 SLC22A23A1A5C7 686 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 FAM90A7PA6NKC0 464 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 FAM90A22PA8MWA6 464 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 FAM90A12PA8MX19 464 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 FAM90A23PA8MXZ1 464 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 MCIDASD6RGH6 385 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 TOM1L1O75674 476 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 AKAP3O75969 853 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 MOCS3O95396 460 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 LCA5LO95447 670 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 SGPL1O95470 568 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 PLAUP00749 431 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 CALB1P05937 261 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 HNRNPA1P09651 372 aaKnown RBP eCLIP4.17□□□□□ -1.74
ATRX-209ENST00000623242 PKMP14618 531 aaKnown RBP4.17□□□□□ -1.74
ATRX-209ENST00000623242 PRKCIP41743 596 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 NR1H2P55055 460 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 EIF3BP55884 814 aaKnown RBP4.17□□□□□ -1.74
ATRX-209ENST00000623242 VAMP2P63027 116 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 CBX1P83916 185 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 POU5F1Q01860 360 aaKnown RBP4.17□□□□□ -1.74
ATRX-209ENST00000623242 GCNT1Q02742 428 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 CAV1Q03135 178 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 GFPT1Q06210 699 aaPredicted RBP4.17□□□□□ -1.74
ATRX-209ENST00000623242 GOLGA8FQ08AF8 430 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 GOLGA8DPQ0D2H9 430 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 MTA1Q13330 715 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 ITGA7Q13683 1181 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 SMC1AQ14683 1233 aaKnown RBP4.17□□□□□ -1.74
ATRX-209ENST00000623242 DRAP1Q14919 205 aaPredicted RBP4.17□□□□□ -1.74
ATRX-209ENST00000623242 SLMAPQ14BN4 828 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 PTGISQ16647 500 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 ANXA2RQ3ZCQ2 193 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 ARL13AQ5H913 290 aaPredicted RBP4.17□□□□□ -1.74
ATRX-209ENST00000623242 CEP78Q5JTW2 689 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 WDR45BQ5MNZ6 344 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 UBAP2Q5T6F2 1119 aaKnown RBP4.17□□□□□ -1.74
ATRX-209ENST00000623242 DENND1BQ6P3S1 775 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 DCUN1D2Q6PH85 259 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 TRIM65Q6PJ69 517 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 GSTA5Q7RTV2 222 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 MAP7D3Q8IWC1 876 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 VPS52Q8N1B4 723 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 PAQR4Q8N4S7 273 aaPredicted RBP4.17□□□□□ -1.74
ATRX-209ENST00000623242 EIF1ADQ8N9N8 165 aaKnown RBP4.17□□□□□ -1.74
ATRX-209ENST00000623242 AFAP1L1Q8TED9 768 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 WIPF2Q8TF74 440 aaPredicted RBP4.17□□□□□ -1.74
ATRX-209ENST00000623242 ZFPM2Q8WW38 1151 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 IFT81Q8WYA0 676 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 RFFLQ8WZ73 363 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 TMEM143Q96AN5 459 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 VCPIP1Q96JH7 1222 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 ADAD1Q96M93 576 aaKnown RBP4.17□□□□□ -1.74
ATRX-209ENST00000623242 PPM1MQ96MI6 270 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 NLRP4Q96MN2 994 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 TSPAN18Q96SJ8 248 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 CHP1Q99653 195 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 AGPAT1Q99943 283 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 CLSTN3Q9BQT9 956 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 FAM213AQ9BRX8 229 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 POLR3FQ9H1D9 316 aaPredicted RBP4.17□□□□□ -1.74
ATRX-209ENST00000623242 UPF3AQ9H1J1 476 aaKnown RBP4.17□□□□□ -1.74
ATRX-209ENST00000623242 STN1Q9H668 368 aaKnown RBP4.17□□□□□ -1.74
ATRX-209ENST00000623242 C11orf49Q9H6J7 331 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 RPF1Q9H9Y2 349 aaKnown RBP4.17□□□□□ -1.74
ATRX-209ENST00000623242 POLD4Q9HCU8 107 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 UBN1Q9NPG3 1134 aa4.17□□□□□ -1.74
ATRX-209ENST00000623242 SETD4Q9NVD3 440 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms