RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 SDHDO14521 159 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 HTRA2O43464 458 aaPredicted RBP12.33□□□□□ -0.44
LITAF-221ENST00000622633 AKAP10O43572 662 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 KPNA6O60684 536 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 ANXA9O76027 345 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 THP07101 528 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 NEDD8Q15843 81 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 TIGD5Q53EQ6 642 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 NHSL2Q5HYW2 709 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 NOMO2Q5JPE7 1267 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 FAM219BQ5XKK7 198 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 ZNF470Q6ECI4 717 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 DBX2Q6ZNG2 339 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 GK5Q6ZS86 529 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 USP50Q70EL3 339 aaPredicted RBP12.33□□□□□ -0.44
LITAF-221ENST00000622633 RPS27LQ71UM5 84 aaKnown RBP12.33□□□□□ -0.44
LITAF-221ENST00000622633 KLHDC8BQ8IXV7 354 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 FAM9CQ8IZT9 166 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 ZCCHC7Q8N3Z6 543 aaKnown RBP12.33□□□□□ -0.44
LITAF-221ENST00000622633 PCDH20Q8N6Y1 951 aaKnown RBP12.33□□□□□ -0.44
LITAF-221ENST00000622633 OR7D4Q8NG98 312 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 S100ZQ8WXG8 99 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 LPGAT1Q92604 370 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 KLHL32Q96NJ5 620 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 OPALINQ96PE5 141 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 RTP3Q9BQQ7 232 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 OSBPL2Q9H1P3 480 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 POMKQ9H5K3 350 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 NTN4Q9HB63 628 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 MCCC2Q9HCC0 563 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 DIABLOQ9NR28 239 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 RBM22Q9NW64 420 aaKnown RBP eCLIP12.33□□□□□ -0.44
LITAF-221ENST00000622633 PAQR5Q9NXK6 330 aaPredicted RBP12.33□□□□□ -0.44
LITAF-221ENST00000622633 NEU3Q9UQ49 428 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 SNX8Q9Y5X2 465 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 DGKBQ9Y6T7 804 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 CTDSP2O14595 271 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 MAFKO60675 156 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 GNAO1P09471 354 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 SPNP16150 400 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 CBLP22681 906 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 TALDO1P37837 337 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 BLVRAP53004 296 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 CSHL1Q14406 222 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 ZNF789Q5FWF6 425 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 BRMS1LQ5PSV4 323 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 RBM20Q5T481 1227 aaKnown RBP12.32□□□□□ -0.44
LITAF-221ENST00000622633 FANK1Q8TC84 345 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 LRRC20Q8TCA0 184 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 GLT1D1Q96MS3 346 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 MRPL57Q9BQC6 102 aaKnown RBP12.32□□□□□ -0.44
LITAF-221ENST00000622633 TUBA1CQ9BQE3 449 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 TNFRSF12AQ9NP84 129 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 TMLHEQ9NVH6 421 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 ADA2Q9NZK5 511 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 FLRT1Q9NZU1 646 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 FBXO5Q9UKT4 447 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 DICER1Q9UPY3 1922 aaKnown RBP12.32□□□□□ -0.44
LITAF-221ENST00000622633 BPTFQ12830 3046 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 DNAH12Q6ZR08 3092 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 CENPXA8MT69 81 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 FAM25AB3EWG3 89 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 FAM25CB3EWG5 89 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 FAM25GB3EWG6 89 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 ACOT8O14734 319 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 MATN3O15232 486 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 PAGE1O75459 146 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 TADA2AO75478 443 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 BCAS2O75934 225 aaPredicted RBP12.32□□□□□ -0.44
LITAF-221ENST00000622633 HLA-DQB2P05538 268 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 BMP4P12644 408 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 KCNA5P22460 613 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 ADRA1AP35348 466 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 HSD17B2P37059 387 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 PGFP49763 221 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 SCNN1GP51170 649 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 SLC12A2P55011 1212 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 IL1RL1Q01638 556 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 BFSP2Q13515 415 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 AASDHQ4L235 1098 aaPredicted RBP12.32□□□□□ -0.44
LITAF-221ENST00000622633 C9orf131Q5VYM1 1079 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 GTF2IRD2BQ6EKJ0 949 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 GTF2IRD2Q86UP8 949 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 C2CD4AQ8NCU7 369 aaPredicted RBP12.32□□□□□ -0.44
LITAF-221ENST00000622633 PJA1Q8NG27 643 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 TFAP2CQ92754 450 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 SEMA6AQ9H2E6 1030 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 CSNK1G1Q9HCP0 422 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 FAM105AQ9NUU6 356 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 MTRRQ9UBK8 725 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 SFMBT1Q9UHJ3 866 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 NUDT5Q9UKK9 219 aa12.32□□□□□ -0.44
LITAF-221ENST00000622633 A8MUA0 341 aa12.31□□□□□ -0.44
LITAF-221ENST00000622633 NPHS1O60500 1241 aa12.31□□□□□ -0.44
LITAF-221ENST00000622633 DEAF1O75398 565 aaPredicted RBP12.31□□□□□ -0.44
LITAF-221ENST00000622633 KATNA1O75449 491 aa12.31□□□□□ -0.44
LITAF-221ENST00000622633 NDST3O95803 873 aa12.31□□□□□ -0.44
LITAF-221ENST00000622633 HDCP19113 662 aa12.31□□□□□ -0.44
LITAF-221ENST00000622633 ATP5F1P24539 256 aaPredicted RBP12.31□□□□□ -0.44
LITAF-221ENST00000622633 PCSK1P29120 753 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms