RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 YJEFN3A6XGL0 299 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 CAPN14A8MX76 684 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 PTGES3LE9PB15 166 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 KPNA4O00629 521 aaPredicted RBP9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 HDAC3O15379 428 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 C8GP07360 202 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 RYKP34925 604 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 POU5F1Q01860 360 aaKnown RBP9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 GBE1Q04446 702 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 ITGADQ13349 1161 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 BRAT1Q6PJG6 821 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 TMEM192Q8IY95 271 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 FAM81AQ8TBF8 368 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 WDR60Q8WVS4 1066 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 P2RY13Q9BPV8 354 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 KXD1Q9BQD3 176 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 DCUN1D5Q9BTE7 237 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 FBXW11Q9UKB1 542 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 A0A087WXM4 84 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 ATP6AP2A0A1C7CYW4 349 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 ATP6AP2O75787 350 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 LCA5LO95447 670 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 RB1P06400 928 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 ANPEPP15144 967 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 KIR3DL1P43629 444 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 SLC7A2P52569 658 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 CASP6P55212 293 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 NFATC2Q13469 925 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 RAPSNQ13702 412 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 ATP1A4Q13733 1029 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 TIMM50Q3ZCQ8 353 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 DHDDSQ86SQ9 333 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 RASGEF1CQ8N431 466 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 ZNF304Q9HCX3 659 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 CACNG4Q9UBN1 327 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 FKBPLQ9UIM3 349 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 ITGB1BP2Q9UKP3 347 aa9.69□□□□□ -0.86
CLTCL1-211ENST00000621271 PIK3C2AO00443 1686 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 TBX18O95935 607 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 ZNF8P17098 575 aaPredicted RBP9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 ATP5A1P25705 553 aaKnown RBP9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 RPL5P46777 297 aaKnown RBP9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 PKNOX1P55347 436 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 HEPACAMQ14CZ8 416 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 RSBN1Q5VWQ0 802 aaPredicted RBP9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 RINLQ6ZS11 566 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 DEPDC4Q8N2C3 294 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 Q8N9G6 341 aaPredicted RBP9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 FAXDC2Q96IV6 333 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 NUSAP1Q9BXS6 441 aaKnown RBP9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 GRIN2DO15399 1336 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 ESR1P03372 595 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 SLC7A1P30825 629 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 PTGER3P43115 390 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 MARCKSL1P49006 195 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 CHIT1Q13231 466 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 PDK3Q15120 406 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 ZBTB6Q15916 424 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 ZC3H14Q6PJT7 736 aaKnown RBP9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 ARCQ7LC44 396 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 IRF2BP2Q7Z5L9 587 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 PXYLP1Q8TE99 480 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 EEF1AKMT1Q8WVE0 214 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 NKX2-4Q9H2Z4 354 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 PTGFRNQ9P2B2 879 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 EFR3BQ9Y2G0 817 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 FAM237BA0A1B0GVD1 139 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 RBMXL2O75526 392 aaKnown RBP9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 SLC22A3O75751 556 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 IL6P05231 212 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 RGS8P57771 180 aaPredicted RBP9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 RPL6Q02878 288 aaKnown RBP9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 BNIP1Q12981 228 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 TAF1AQ15573 450 aaPredicted RBP9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 MFSD5Q6N075 450 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 SLC9B2Q86UD5 537 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 TMEM125Q96AQ2 219 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 CRELD1Q96HD1 420 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 TCF12Q99081 682 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 OSBPL7Q9BZF2 842 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 ARHGAP39Q9C0H5 1083 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 HSD3B7Q9H2F3 369 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 IPPKQ9H8X2 491 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 MRPL39Q9NYK5 338 aaKnown RBP9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 DAPK2Q9UIK4 370 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 SH3GLB1Q9Y371 365 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 ATRNL1Q5VV63 1379 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 DCLK1O15075 740 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 EDF1O60869 148 aaKnown RBP9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 BANF1O75531 89 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 AP2A1O95782 977 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 F2P00734 622 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 TYRP14679 529 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 RABGGTBP53611 331 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 PLA2G16P53816 162 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 SMU1Q2TAY7 513 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 ZNF792Q3KQV3 632 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 NUP54Q7Z3B4 507 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 LRRTM4Q86VH4 590 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 CAMK1DQ8IU85 385 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms