RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 GLE1Q53GS7 698 aaKnown RBP7.71□□□□□ -1.17
CLK1-215ENST00000621181 MEI1Q5TIA1 1274 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 CAPRIN2Q6IMN6 1127 aaKnown RBP7.71□□□□□ -1.17
CLK1-215ENST00000621181 POLNQ7Z5Q5 900 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 PPP1R3BQ86XI6 285 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 GALNT11Q8NCW6 608 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 CSPG4P5Q96PW8 444 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 ALS2CR12Q96Q35 445 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 ZNF768Q9H5H4 540 aaKnown RBP7.71□□□□□ -1.17
CLK1-215ENST00000621181 HAUS2Q9NVX0 235 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 PADI1Q9ULC6 663 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 CHKBQ9Y259 395 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 A1L4Q6 167 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 GRID2IPA4D2P6 1211 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 TOX3O15405 576 aaPredicted RBP7.71□□□□□ -1.18
CLK1-215ENST00000621181 FZD6O60353 706 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 MTA2O94776 668 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 VIPP01282 170 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 C9P02748 559 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 MT-ND3P03897 115 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 IL1R2P27930 398 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 PCK1P35558 622 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 SEPT7Q16181 437 aaKnown RBP7.71□□□□□ -1.18
CLK1-215ENST00000621181 TDRD12Q587J7 1177 aaKnown RBP7.71□□□□□ -1.18
CLK1-215ENST00000621181 HSP90B2PQ58FF3 399 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 HENMT1Q5T8I9 393 aaKnown RBP7.71□□□□□ -1.18
CLK1-215ENST00000621181 CYB5D1Q6P9G0 228 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 EMBQ6PCB8 327 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 TMEM26Q6ZUK4 368 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 APLFQ8IW19 511 aaPredicted RBP7.71□□□□□ -1.18
CLK1-215ENST00000621181 LRRC57Q8N9N7 239 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 LPCAT1Q8NF37 534 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 CCHCR1Q8TD31 782 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 PLEKHG4BQ96PX9 1271 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 PACSIN1Q9BY11 444 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 CARD9Q9H257 536 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 DEF6Q9H4E7 631 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 FAM83DQ9H4H8 585 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 ACTL8Q9H568 366 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 KLC4Q9NSK0 619 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 RCOR3Q9P2K3 495 aaPredicted RBP7.71□□□□□ -1.18
CLK1-215ENST00000621181 PCDHGA6Q9Y5G7 932 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 SCINQ9Y6U3 715 aa7.71□□□□□ -1.18
CLK1-215ENST00000621181 TNRC6AQ8NDV7 1962 aaKnown RBP7.7□□□□□ -1.18
CLK1-215ENST00000621181 HIVEP3Q5T1R4 2406 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 CELSR2Q9HCU4 2923 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 PDZK1P1A8MUH7 402 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 FADS2P1A8MWK0 482 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 C21orf140B9A014 251 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 CES2O00748 559 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 NUAK1O60285 661 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 SEMA7AO75326 666 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 SLC25A14O95258 325 aaPredicted RBP7.7□□□□□ -1.18
CLK1-215ENST00000621181 FTLP02792 175 aaPredicted RBP7.7□□□□□ -1.18
CLK1-215ENST00000621181 PDGFAP04085 211 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 CXCR5P32302 372 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 TNNT3P45378 269 aaPredicted RBP7.7□□□□□ -1.18
CLK1-215ENST00000621181 LEPRP48357 1165 aaKnown RBP7.7□□□□□ -1.18
CLK1-215ENST00000621181 SPINT3P49223 89 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 PGDP52209 483 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 UBE2IP63279 158 aaKnown RBP7.7□□□□□ -1.18
CLK1-215ENST00000621181 DSC2Q02487 901 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 SEMA5AQ13591 1074 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 DNASE1L3Q13609 305 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 INSCQ1MX18 579 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 BOLA3Q53S33 107 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 ANKRD20A8PQ5CZ79 823 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 CACHD1Q5VU97 1274 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 IRGCQ6NXR0 463 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 CRTC3Q6UUV7 619 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 ZNF571Q7Z3V5 609 aaPredicted RBP7.7□□□□□ -1.18
CLK1-215ENST00000621181 LRRC49Q8IUZ0 686 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 RAVER1Q8IY67 606 aaKnown RBP7.7□□□□□ -1.18
CLK1-215ENST00000621181 IQCKQ8N0W5 287 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 SEC14L1Q92503 715 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 ZBTB9Q96C00 473 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 ZNF653Q96CK0 615 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 MS4A14Q96JA4 679 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 SLC25A23Q9BV35 468 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 TDRD1Q9BXT4 1180 aaKnown RBP7.7□□□□□ -1.18
CLK1-215ENST00000621181 TRIM55Q9BYV6 548 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 OR2AG1Q9H205 316 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 UCK1Q9HA47 277 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 MRPL47Q9HD33 250 aaKnown RBP7.7□□□□□ -1.18
CLK1-215ENST00000621181 PDE7BQ9NP56 450 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 LHX9Q9NQ69 397 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 CUEDC1Q9NWM3 386 aaPredicted RBP7.7□□□□□ -1.18
CLK1-215ENST00000621181 PKD2L2Q9NZM6 624 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 MAP10Q9P2G4 905 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 ATXN10Q9UBB4 475 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 LCMT1Q9UIC8 334 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 CNOT6Q9ULM6 557 aaKnown RBP7.7□□□□□ -1.18
CLK1-215ENST00000621181 DNAJC16Q9Y2G8 782 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 SLC30A1Q9Y6M5 507 aa7.7□□□□□ -1.18
CLK1-215ENST00000621181 ZNF106Q9H2Y7 1883 aaKnown RBP7.7□□□□□ -1.18
CLK1-215ENST00000621181 KIF1CO43896 1103 aaKnown RBP7.69□□□□□ -1.18
CLK1-215ENST00000621181 SPAG6O75602 509 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 RECKO95980 971 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 RARAP10276 462 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 TCF4P15884 667 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms