RNA–Protein interactions for RNA: ENST00000619348.4

CYFIP1-211, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 3,471 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-211ENST00000619348 CDH1P12830 882 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 ARCN1P48444 511 aaKnown RBP13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 PTGR1Q14914 329 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 TAB1Q15750 504 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 CRY1Q16526 586 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 DEPDC1Q5TB30 811 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 SPRED1Q7Z699 444 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 CIR1Q86X95 450 aaPredicted RBP13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 CILP2Q8IUL8 1156 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 HID1Q8IV36 788 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 CRYBG2Q8N1P7 616 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 RHNO1Q9BSD3 238 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 MROQ9BYG7 248 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 ZNF408Q9H9D4 720 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 EHD3Q9NZN3 535 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 IGKV6-21A0A0C4DH24 114 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 CCDC162PA2VCL2 907 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 CCRL2O00421 344 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 SEC22BO75396 215 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 LCKP06239 509 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 CCDC159P0C7I6 412 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 GSTM2P28161 218 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 AQP1P29972 269 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 NUDT6P53370 316 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 EMX1Q04741 257 aaPredicted RBP13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 RAPSNQ13702 412 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 SPANXN2Q5MJ10 180 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 RBM48Q5RL73 367 aaKnown RBP13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 LBX2Q6XYB7 198 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 GPSM1Q86YR5 675 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 UBASH3BQ8TF42 649 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 CGREF1Q99674 301 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 AGO3Q9H9G7 860 aaKnown RBP13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 NEK6Q9HC98 313 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 TBC1D14Q9P2M4 693 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 PMF1-BGLAPU3KQ54 211 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 LOXHD1Q8IVV2 1947 aa13.1□□□□□ -0.31
CYFIP1-211ENST00000619348 TYW5A2RUC4 315 aaKnown RBP13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 SOBPA7XYQ1 873 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 TLR5O60602 858 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 DNTTP04053 509 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 PNPLA4P41247 253 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 RENBPP51606 427 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 HMGCS1Q01581 520 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 TP53BP2Q13625 1128 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 TUBA3CQ13748 450 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 ADPRMQ3LIE5 342 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 TMEM207Q6UWW9 146 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 LPPQ93052 612 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 MRGPRX2Q96LB1 330 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 RPRD1AQ96P16 312 aaPredicted RBP13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 FCRL5Q96RD9 977 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 RBM4BQ9BQ04 359 aaKnown RBP13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 RBM4Q9BWF3 364 aaKnown RBP13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 YTHDF1Q9BYJ9 559 aaKnown RBP13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 NUAK2Q9H093 628 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 TUBB1Q9H4B7 451 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 WDR6Q9NNW5 1121 aaKnown RBP13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 SDR39U1Q9NRG7 319 aaPredicted RBP13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 STRCQ7RTU9 1775 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 KIAA1217Q5T5P2 1943 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 AIREO43918 545 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 MGEA5O60502 916 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 MT-ND2P03891 347 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 ARMC4Q5T2S8 1044 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 RAP1GAP2Q684P5 730 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 OR56A4Q8NGH8 313 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 LGALS12Q96DT0 336 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 SH3GL1Q99961 368 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 LATS2Q9NRM7 1088 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 CATSPERZQ9NTU4 200 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 NOX1Q9Y5S8 564 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 WNK3Q9BYP7 1800 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 CEP350Q5VT06 3117 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 H0YAE9 185 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 MED26O95402 600 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 SERPINA1P01009 418 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 CHRNA1P02708 482 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 DNAJB2P25686 324 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 DGKEP52429 567 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 IFITM3Q01628 133 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 CTU2Q2VPK5 515 aaKnown RBP13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 OTUD1Q5VV17 481 aaPredicted RBP13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 DCLRE1AQ6PJP8 1040 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 MOB2Q70IA6 237 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 RBM23Q86U06 439 aaKnown RBP13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 COLGALT2Q8IYK4 626 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 TMEM199Q8N511 208 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 OR52B6Q8NGF0 335 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 ATL1Q8WXF7 558 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 HDAC2Q92769 488 aaKnown RBP13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 TSEN34Q9BSV6 310 aaKnown RBP13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 SYTL2Q9HCH5 934 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 PAK1IP1Q9NWT1 392 aaPredicted RBP13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 ENPP5Q9UJA9 477 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 BTBD3Q9Y2F9 522 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 PKP3Q9Y446 797 aa13.09□□□□□ -0.31
CYFIP1-211ENST00000619348 MATN3O15232 486 aa13.08□□□□□ -0.31
CYFIP1-211ENST00000619348 RGS10O43665 173 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms