RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 PCSK6P29122 969 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 SREBF1P36956 1147 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 VEGFCP49767 419 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 OASLQ15646 514 aaKnown RBP3.05□□□□□ -1.92
NEB-220ENST00000618972 MAPKAPK3Q16644 382 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 TMC8Q8IU68 726 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 EPHX4Q8IUS5 362 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 RELL1Q8IUW5 271 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 OR52K1Q8NGK4 314 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 WDR41Q9HAD4 459 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 ZDHHC2Q9UIJ5 367 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 SLC28A1O00337 649 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 TADA2AO75478 443 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 SLC22A3O75751 556 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 TBX18O95935 607 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 GPC3P51654 580 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 DGKEP52429 567 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 DCDC1P59894 354 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 BAMBIQ13145 260 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 PGS1Q32NB8 556 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 WSCD1Q658N2 575 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 ARHGAP36Q6ZRI8 547 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 LIMS2Q7Z4I7 341 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 EDEM1Q92611 657 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 C7orf26Q96N11 449 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 EBNA1BP2Q99848 306 aaKnown RBP3.05□□□□□ -1.92
NEB-220ENST00000618972 TMED9Q9BVK6 235 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 LYRM2Q9NU23 88 aaPredicted RBP3.05□□□□□ -1.92
NEB-220ENST00000618972 KLF11O14901 512 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 GNRH1P01148 92 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 CHMP24386 653 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 ZRANB3Q5FWF4 1079 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 ITFG1Q8TB96 612 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 FNDC8Q8TC99 324 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 DEDD2Q8WXF8 326 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 SHC3Q92529 594 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 ZFP42Q96MM3 310 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 SPANXCQ9NY87 97 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 SPACA6W5XKT8 324 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 IPO13O94829 963 aaKnown RBP3.05□□□□□ -1.92
NEB-220ENST00000618972 NCF1P14598 390 aaPredicted RBP3.05□□□□□ -1.92
NEB-220ENST00000618972 IL2P60568 153 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 C17orf80Q9BSJ5 609 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 UCK2Q9BZX2 261 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 GRIP2Q9C0E4 1043 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 IRS2Q9Y4H2 1338 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 TCRBV9S1A1TA0A576 114 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 HMX3A6NHT5 357 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 GJB3O75712 270 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 TMEM63AO94886 807 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 FCER2P06734 321 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 LINC00032P0C843 101 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 IL1R1P14778 569 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 PTBP1P26599 531 aaKnown RBP eCLIP3.05□□□□□ -1.92
NEB-220ENST00000618972 TMEM214Q6NUQ4 689 aaKnown RBP3.05□□□□□ -1.92
NEB-220ENST00000618972 POLE4Q9NR33 117 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 NCKAP1Q9Y2A7 1128 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 A8MVJ9 347 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 OAS1P00973 400 aaKnown RBP3.05□□□□□ -1.92
NEB-220ENST00000618972 MYL3P08590 195 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 CUL2Q13617 745 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 PYDC2Q56P42 97 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 PGBD2Q6P3X8 592 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 TIPARPQ7Z3E1 657 aaKnown RBP3.05□□□□□ -1.92
NEB-220ENST00000618972 SLC51BQ86UW2 128 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 IFNL1Q8IU54 200 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 SMG8Q8ND04 991 aaKnown RBP3.05□□□□□ -1.92
NEB-220ENST00000618972 ZNF431Q8TF32 576 aaPredicted RBP3.05□□□□□ -1.92
NEB-220ENST00000618972 SMARCD2Q92925 531 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 DCUN1D1Q96GG9 259 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 TCF12Q99081 682 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 PAFAH2Q99487 392 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 MUC3BQ9H195 1237 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 RIBC2Q9H4K1 309 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 RPF2Q9H7B2 306 aaKnown RBP3.05□□□□□ -1.92
NEB-220ENST00000618972 SAMD4AQ9UPU9 718 aaKnown RBP3.05□□□□□ -1.92
NEB-220ENST00000618972 OR51F1A6NGY5 319 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 TRIM3O75382 744 aaPredicted RBP3.05□□□□□ -1.92
NEB-220ENST00000618972 OR2B3O76000 313 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 PRSS56P0CW18 603 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 AKR1C8PQ5T2L2 129 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 OGFOD2Q6N063 350 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 FAM131BQ86XD5 332 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 SIMC1Q8NDZ2 872 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 WDCPQ9H6R7 721 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 TMEM138Q9NPI0 162 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 POLR3BQ9NW08 1133 aaPredicted RBP3.05□□□□□ -1.92
NEB-220ENST00000618972 ASH2LQ9UBL3 628 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 VPS28Q9UK41 221 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 NUP50Q9UKX7 468 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 C2orf74A8MZ97 194 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 STAG3L1P0CL83 205 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 IMPDH1P20839 514 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 CERS1P27544 350 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 DCKP27707 260 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 NMBRP28336 390 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 CDKN2BP42772 138 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 ABATP80404 500 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 INTS6LQ5JSJ4 861 aaKnown RBP3.05□□□□□ -1.92
NEB-220ENST00000618972 ADGRD1Q6QNK2 874 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms