RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 SFRP1Q8N474 314 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 FBXO39Q8N4B4 442 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 TTC30BQ8N4P2 665 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 ATP6V0D2Q8N8Y2 350 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 DRAXINQ8NBI3 349 aaPredicted RBP4.27□□□□□ -1.73
SEC22B-202ENST00000618538 PAPD5Q8NDF8 572 aaKnown RBP4.27□□□□□ -1.73
SEC22B-202ENST00000618538 GIPC2Q8TF65 315 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 EEF1AKMT1Q8WVE0 214 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 TANKQ92844 425 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 PEX13Q92968 403 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 PBXIP1Q96AQ6 731 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 PPWD1Q96BP3 646 aaKnown RBP4.27□□□□□ -1.73
SEC22B-202ENST00000618538 PSKH2Q96QS6 385 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 BEGAINQ9BUH8 593 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 C1QTNF3Q9BXJ4 246 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 TDRD1Q9BXT4 1180 aaKnown RBP4.27□□□□□ -1.73
SEC22B-202ENST00000618538 FBXO44Q9H4M3 255 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 ALG2Q9H553 416 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 IKZF5Q9H5V7 419 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 ZFYVE28Q9HCC9 887 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 BPIFA1Q9NP55 256 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 RSL24D1Q9UHA3 163 aaKnown RBP4.27□□□□□ -1.73
SEC22B-202ENST00000618538 ZNF639Q9UID6 485 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 RNF112Q9ULX5 631 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 MYRFQ9Y2G1 1151 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 NDUFAF1Q9Y375 327 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 PCDHB5Q9Y5E4 795 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 PCDHGC4Q9Y5F7 938 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 ZFP37Q9Y6Q3 630 aaPredicted RBP4.27□□□□□ -1.73
SEC22B-202ENST00000618538 SCN8AQ9UQD0 1980 aa4.27□□□□□ -1.73
SEC22B-202ENST00000618538 TMEM88BA6NKF7 163 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 NT5C1B-RDH14C9J2C7 533 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 OR7A17O14581 309 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 ANGPT2O15123 496 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 INPP4BO15327 924 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 SEPT4O43236 478 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 SPINT1O43278 529 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 TLR5O60602 858 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 SNAP91O60641 907 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 SEC24DO94855 1032 aaPredicted RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 TMCC1O94876 653 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 ATE1O95260 518 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 RASAL1O95294 804 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 BMP10O95393 424 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 ESRRBO95718 433 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 B3GALT4O96024 378 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 C1QCP02747 245 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 CKBP12277 381 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 IDO1P14902 403 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 ELNP15502 786 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 SHMT2P34897 504 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 MAPKAPK2P49137 400 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 FLT3LGP49771 235 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 SCNN1BP51168 640 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 GALK1P51570 392 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 CLCN7P51798 805 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 MTPNP58546 118 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 YBEYP58557 167 aaPredicted RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 FAM189BP81408 668 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 ARF5P84085 180 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 GNA12Q03113 381 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 PRKCZQ05513 592 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 RING1Q06587 406 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 MERTKQ12866 999 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 BNIP2Q12982 314 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 DUSP4Q13115 394 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 PMS2P3Q13401 168 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 NFYCQ13952 458 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 BTG3Q14201 252 aaPredicted RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 KIAA0040Q15053 153 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 CYP51A1Q16850 503 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 GEN1Q17RS7 908 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 ANKDD1AQ495B1 522 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 FUT11Q495W5 492 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 KCTD21Q4G0X4 260 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 COQ5Q5HYK3 327 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 FAM171A1Q5VUB5 890 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 CXorf57Q6NSI4 855 aaKnown RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 NANOGP8Q6NSW7 305 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 DUS1LQ6P1R4 473 aaKnown RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 PRSS55Q6UWB4 352 aaPredicted RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 GLB1LQ6UWU2 654 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 LINGO4Q6UY18 593 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 USP51Q70EK9 711 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 RALGPS2Q86X27 583 aaPredicted RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 RIMKLAQ8IXN7 391 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 C10orf111Q8N326 155 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 ZNF786Q8N393 782 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 AFAP1L2Q8N4X5 818 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 TMEM199Q8N511 208 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 DTWD1Q8N5C7 304 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 CDYL2Q8N8U2 506 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 PCYOX1LQ8NBM8 494 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 TRPV3Q8NET8 790 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 LPCAT1Q8NF37 534 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 HM13Q8TCT9 377 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 BPIFB1Q8TDL5 484 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 ADAMTS16Q8TE57 1224 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 DDI1Q8WTU0 396 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 VOPP1Q96AW1 172 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms