RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 PASD1Q8IV76 773 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 TRIM48Q8IWZ4 208 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 SYTL1Q8IYJ3 562 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 PGBD5Q8N414 524 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 TSEN2Q8NCE0 465 aaKnown RBP4.46□□□□□ -1.69
SNCA-213ENST00000618500 THAP3Q8WTV1 239 aaPredicted RBP4.46□□□□□ -1.69
SNCA-213ENST00000618500 SMARCE1Q969G3 411 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 LHPPQ9H008 270 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 OLAHQ9NV23 265 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 IL1RAPL1Q9NZN1 696 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 SCHIP1Q9P0W5 487 aaPredicted RBP4.46□□□□□ -1.69
SNCA-213ENST00000618500 MAPK8IP1Q9UQF2 711 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 PCYT1BQ9Y5K3 369 aaPredicted RBP4.46□□□□□ -1.69
SNCA-213ENST00000618500 DNHD1Q96M86 4753 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 CELSR2Q9HCU4 2923 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 TRIM49BA6NDI0 452 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 FADS2P1A8MWK0 482 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 SOCS6O14544 535 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 CCP110O43303 1012 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 MYBL2P10244 700 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 BRAFP15056 766 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 PEX19P40855 299 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 GABRA4P48169 554 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 FOLH1Q04609 750 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 CHAF1BQ13112 559 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 AGAP7PQ5VUJ5 663 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 RFX8Q6ZV50 586 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 C11orf96Q7Z7L8 435 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 RSC1A1Q92681 617 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 DLG3Q92796 817 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 TADA1Q96BN2 335 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 LINC00615Q96LM1 132 aaPredicted RBP4.46□□□□□ -1.7
SNCA-213ENST00000618500 AGAP4Q96P64 663 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 TDRD1Q9BXT4 1180 aaKnown RBP4.46□□□□□ -1.7
SNCA-213ENST00000618500 GDPD2Q9HCC8 539 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 ATXN10Q9UBB4 475 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 RWDD2AQ9UIY3 292 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 DNAJC12Q9UKB3 198 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 AJAP1Q9UKB5 411 aaPredicted RBP4.46□□□□□ -1.7
SNCA-213ENST00000618500 TMEM98Q9Y2Y6 226 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 JRKO75564 520 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 FKBP9O95302 570 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 PIM1P11309 404 aaPredicted RBP4.46□□□□□ -1.7
SNCA-213ENST00000618500 MTHFD1P11586 935 aaKnown RBP4.46□□□□□ -1.7
SNCA-213ENST00000618500 IDSP22304 550 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 CD86P42081 329 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 HALP42357 657 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 MAPK9P45984 424 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 GLRBP48167 497 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 NUMBP49757 651 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 AP1B1Q10567 949 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 LLGL1Q15334 1064 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 ATP13A4Q4VNC1 1196 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 MON1BQ7L1V2 547 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 SMYD4Q8IYR2 804 aaPredicted RBP4.46□□□□□ -1.7
SNCA-213ENST00000618500 MMP21Q8N119 569 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 CHTF18Q8WVB6 975 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 NELFBQ8WX92 580 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 PTERQ96BW5 349 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 EXOC2Q96KP1 924 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 GBP5Q96PP8 586 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 TRAPPC9Q96Q05 1148 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 ALPK1Q96QP1 1244 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 RIOK2Q9BVS4 552 aaKnown RBP4.46□□□□□ -1.7
SNCA-213ENST00000618500 SARGQ9BW04 601 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 AP1M1Q9BXS5 423 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 STK33Q9BYT3 514 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 ACTR5Q9H9F9 607 aaPredicted RBP4.46□□□□□ -1.7
SNCA-213ENST00000618500 SEMA3GQ9NS98 782 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 FANCLQ9NW38 375 aa4.46□□□□□ -1.7
SNCA-213ENST00000618500 TRAV17A0A0B4J275 112 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 FOXN3O00409 490 aaPredicted RBP4.45□□□□□ -1.7
SNCA-213ENST00000618500 MAFKO60675 156 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 USP1O94782 785 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 UMODP07911 640 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 ACP5P13686 325 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 CD46P15529 392 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 MMP11P24347 488 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 CASP6P55212 293 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 JAM2P57087 298 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 ABRQ12979 859 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 SLC5A12Q1EHB4 618 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 C15orf59Q2T9L4 293 aaPredicted RBP4.45□□□□□ -1.7
SNCA-213ENST00000618500 BCL7AQ4VC05 210 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 KRTCAP3Q53RY4 240 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 DNTTIP2Q5QJE6 756 aaKnown RBP4.45□□□□□ -1.7
SNCA-213ENST00000618500 LCN10Q6JVE6 187 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 TIGD7Q6NT04 549 aaPredicted RBP4.45□□□□□ -1.7
SNCA-213ENST00000618500 TLDC1Q6P9B6 456 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 ISLR2Q6UXK2 745 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 CXXC5Q7LFL8 322 aaKnown RBP4.45□□□□□ -1.7
SNCA-213ENST00000618500 MRGPRGQ86SM5 289 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 NOP9Q86U38 636 aaKnown RBP4.45□□□□□ -1.7
SNCA-213ENST00000618500 ZNF761Q86XN6 746 aaPredicted RBP4.45□□□□□ -1.7
SNCA-213ENST00000618500 JOSD2Q8TAC2 188 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 HAS2Q92819 552 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 CXorf40BQ96DE9 158 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 TSGA13Q96PP4 275 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 DMRTA2Q96SC8 542 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 CCM2Q9BSQ5 444 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms