RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 MAP7D1Q3KQU3 841 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 CRTC1Q6UUV9 634 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 IL27RAQ6UWB1 636 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 MIER2Q8N344 545 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 DNAJB14Q8TBM8 379 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 METTL6Q8TCB7 284 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 POF1BQ8WVV4 589 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 KLHL4Q9C0H6 718 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 ASB3Q9Y575 518 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 DPPA5A6NC42 116 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 ANGPT2O15123 496 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 FFAR2O15552 330 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 LHCGRP22888 699 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 UFM1P61960 85 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 ATP13A5Q4VNC0 1218 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 LY6G5CQ5SRR4 150 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 C22orf39Q6P5X5 142 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 GPRIN3Q6ZVF9 776 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 SNX20Q7Z614 316 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 RBFAQ8N0V3 343 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 STK40Q8N2I9 435 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 PQLC1Q8N2U9 271 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 FNDC5Q8NAU1 212 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 OR56A4Q8NGH8 313 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 BADQ92934 168 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 MTFMTQ96DP5 389 aaKnown RBP12.24□□□□□ -0.45
CIITA-212ENST00000618207 LRGUKQ96M69 825 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 ZSWIM3Q96MP5 696 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.24□□□□□ -0.45
CIITA-212ENST00000618207 TRIM38O00635 465 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 HTRA2O43464 458 aaPredicted RBP12.24□□□□□ -0.45
CIITA-212ENST00000618207 ESRRBO95718 433 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 CHEK2O96017 543 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 PENKP01210 267 aaPredicted RBP12.24□□□□□ -0.45
CIITA-212ENST00000618207 RHOP08100 348 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 LINC00271P0C7V0 271 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 TYRP14679 529 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 EPCAMP16422 314 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 SYN1P17600 705 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 GJA8P48165 433 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 HSPA14Q0VDF9 509 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 MYLK3Q32MK0 819 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 SLC44A4Q53GD3 710 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 IL23RQ5VWK5 629 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 SBSNQ6UWP8 590 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 PHYKPLQ8IUZ5 450 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 RBM12BQ8IXT5 1001 aaKnown RBP12.24□□□□□ -0.45
CIITA-212ENST00000618207 LILRA2Q8N149 483 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 MYO1HQ8N1T3 1032 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 FAM110BQ8TC76 370 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 DLG3Q92796 817 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 SCAMP4Q969E2 229 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 PBXIP1Q96AQ6 731 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 ASB2Q96Q27 587 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 SLX1AQ9BQ83 275 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 SUV39H2Q9H5I1 410 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 SPAG4Q9NPE6 437 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 LMCD1Q9NZU5 365 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 CIDEBQ9UHD4 219 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 ATG2BQ96BY7 2078 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 TLL1O43897 1013 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 FGBP02675 491 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 MYOGP15173 224 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 ACRV1P26436 265 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 SPAM1P38567 509 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 ARHGEF7Q14155 803 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 ZNF648Q5T619 568 aaPredicted RBP12.23□□□□□ -0.45
CIITA-212ENST00000618207 C1orf53Q5VUE5 145 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 GRASPQ7Z6J2 395 aaPredicted RBP12.23□□□□□ -0.45
CIITA-212ENST00000618207 FAM217AQ8IXS0 508 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 SPDL1Q96EA4 605 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 ANKRD27Q96NW4 1050 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 PKP2Q99959 881 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 SLAMF8Q9P0V8 285 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 MAP10Q9P2G4 905 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 ZNHIT2Q9UHR6 403 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 GNPTGQ9UJJ9 305 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 APPL1Q9UKG1 709 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 PSMD13Q9UNM6 376 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 ANGPTL3Q9Y5C1 460 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 SYNCRIPO60506 623 aaKnown RBP12.23□□□□□ -0.45
CIITA-212ENST00000618207 S100BP04271 92 aaPredicted RBP12.23□□□□□ -0.45
CIITA-212ENST00000618207 PTSQ03393 145 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 BOP1Q14137 746 aaKnown RBP12.23□□□□□ -0.45
CIITA-212ENST00000618207 TRIM25Q14258 630 aaKnown RBP12.23□□□□□ -0.45
CIITA-212ENST00000618207 GOLGA7Q7Z5G4 137 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 OR4F6Q8NGB9 312 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 IPPKQ9H8X2 491 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 TDP1Q9NUW8 608 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 WWOXQ9NZC7 414 aa12.23□□□□□ -0.45
CIITA-212ENST00000618207 LTBP2Q14767 1821 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 ACOT8O14734 319 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 TPST1O60507 370 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 PABPC1P11940 636 aaKnown RBP12.22□□□□□ -0.45
CIITA-212ENST00000618207 AKT1P31749 480 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 GGT5P36269 586 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 RGS4P49798 205 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 GTF2H2Q13888 395 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 TIGD2Q4W5G0 525 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 GTF2H2CQ6P1K8 395 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms