RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 TFAP2BQ92481 460 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 UROC1Q96N76 676 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 TRNT1Q96Q11 434 aaKnown RBP10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 OR52B2Q96RD2 323 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 SLC25A51Q9H1U9 297 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 RHBGQ9H310 441 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 SGK2Q9HBY8 427 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 TESMINQ9Y4I5 508 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 SPATA31D1Q6ZQQ2 1576 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 A0A1W2PPW3 197 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 TRIM64CA6NLI5 447 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 SLC25A14O95258 325 aaPredicted RBP10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 MTHFD1P11586 935 aaKnown RBP10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 SLC15A1P46059 708 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 ENTPD1P49961 510 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 MTPNP58546 118 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 PLD1Q13393 1074 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 SYT16Q17RD7 645 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 CRTC2Q53ET0 693 aaPredicted RBP10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 RBM20Q5T481 1227 aaKnown RBP10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 ZNF730Q6ZMV8 503 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 NCCRP1Q6ZVX7 275 aaPredicted RBP10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 NIPA2Q8N8Q9 360 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 SPATA22Q8NHS9 363 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 ZNF420Q8TAQ5 688 aaPredicted RBP10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 RFKQ969G6 155 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 ADAM2Q99965 735 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 LIN28AQ9H9Z2 209 aaKnown RBP10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 RIMBP3CA6NJZ7 1639 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 RIMBP3BA6NNM3 1639 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 RIMBP3Q9UFD9 1639 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 ARPC2O15144 300 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 SLC7A4O43246 635 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 KLRC2P26717 231 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 FMO3P31513 532 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 MBTD1Q05BQ5 628 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 TUBA3CQ13748 450 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 NPY5RQ15761 445 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 ZBTB6Q15916 424 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 GPR153Q6NV75 609 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 SLC22A16Q86VW1 577 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 DENND1CQ8IV53 801 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 STON2Q8WXE9 905 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 COPS5Q92905 334 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 EMID1Q96A84 441 aaPredicted RBP10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 RAD51AP1Q96B01 352 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 C3orf14Q9HBI5 128 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 PAK6Q9NQU5 681 aaPredicted RBP10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 ZNF358Q9NW07 568 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 MIOSQ9NXC5 875 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 AJAP1Q9UKB5 411 aaPredicted RBP10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 ACOX3O15254 700 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 BCAS2O75934 225 aaPredicted RBP10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 PSKH1P11801 424 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 ANXA8P13928 327 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 ITPKAP23677 461 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 HOXA10P31260 410 aaPredicted RBP10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 SLC6A4P31645 630 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 HSPA7P48741 367 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 TUBA1BP68363 451 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 FAM174BQ3ZCQ3 159 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 C9orf57Q5W0N0 161 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 ABHD15Q6UXT9 468 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 TPGS1Q6ZTW0 290 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 TUBA1AQ71U36 451 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 HID1Q8IV36 788 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 ZNF433Q8N7K0 673 aaPredicted RBP10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 SLC38A4Q969I6 547 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 MRPL9Q9BYD2 267 aaKnown RBP10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 IRF2BPLQ9H1B7 796 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 IQCMA0A1B0GVH7 501 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 OR6C70A6NIJ9 312 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 KERAO60938 352 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 L1CAMP32004 1257 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 DCDC1P59894 354 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 GTF2H2Q13888 395 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 ZNF460Q14592 562 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 IFI44LQ53G44 452 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 FBXO48Q5FWF7 155 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 TPRG1LQ5T0D9 272 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 KIAA0930Q6ICG6 404 aaPredicted RBP10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 GTF2H2CQ6P1K8 395 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 FBXO42Q6P3S6 717 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 ZNF613Q6PF04 617 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 RD3Q7Z3Z2 195 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 GRIN3AQ8TCU5 1115 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 XAGE5Q8WWM1 108 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 GTPBP3Q969Y2 492 aaKnown RBP10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 LRRC58Q96CX6 371 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 HBEGFQ99075 208 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 POLR2J2Q9GZM3 115 aaKnown RBP10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 DTLQ9NZJ0 730 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 AASSQ9UDR5 926 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 MLXQ9UH92 298 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 TBC1D24Q9ULP9 559 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 BCL9O00512 1426 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 ZNF536O15090 1300 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 IFNA7P01567 189 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 IFNA6P05013 189 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 PABPC4LP0CB38 370 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms