RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 RFXANKO14593 260 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 TNFRSF10BO14763 440 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 LRATO95237 230 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 IFNA8P32881 189 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 HTR6P50406 440 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 CREB5Q02930 508 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 DSC1Q08554 894 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 GRB7Q14451 532 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 RFTN1Q14699 578 aaPredicted RBP5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 TAF1AQ15573 450 aaPredicted RBP5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 INO80DQ53TQ3 878 aaPredicted RBP5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 REP15Q6BDI9 236 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 PSAPL1Q6NUJ1 521 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 USP45Q70EL2 814 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 LSMEM2Q8N112 164 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 EEF1AKMT1Q8WVE0 214 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 RPF2Q9H7B2 306 aaKnown RBP5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 SPG21Q9NZD8 308 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 SLC13A4Q9UKG4 626 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 ARPC2O15144 300 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 CD1DP15813 335 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 HOXD9P28356 352 aaPredicted RBP5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 PPP3CCP48454 512 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 PGFP49763 221 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 TRAP1Q12931 704 aaKnown RBP5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 TUBB3Q13509 450 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 CMPK2Q5EBM0 449 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 PIGGQ5H8A4 983 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 OR52E8Q6IFG1 317 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 CHST15Q7LFX5 561 aaPredicted RBP5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 RRM2BQ7LG56 351 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 ANKRD46Q86W74 232 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 HID1Q8IV36 788 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 CMTM8Q8IZV2 173 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZCCHC7Q8N3Z6 543 aaKnown RBP5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 SIDT2Q8NBJ9 832 aaKnown RBP5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 LZICQ8WZA0 190 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 TOP1MTQ969P6 601 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 CCNL2Q96S94 520 aaPredicted RBP5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 RSL24D1Q9UHA3 163 aaKnown RBP5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 ALPIP09923 528 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 PRSS56P0CW18 603 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 RGRP47804 291 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 DMC1Q14565 340 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 SPANXN4Q5MJ08 99 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 GPR107Q5VW38 600 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 DDX53Q86TM3 631 aaKnown RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZNF598Q86UK7 904 aaKnown RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 CNTN4Q8IWV2 1026 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 C8orf59Q8N0T1 100 aaPredicted RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 OR2AP1Q8NGE2 309 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ASZ1Q8WWH4 475 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 CAPNS2Q96L46 248 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 RTP3Q9BQQ7 232 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 SLCO3A1Q9UIG8 710 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 PTGDR2Q9Y5Y4 395 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 EVPLQ92817 2033 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZNF318Q5VUA4 2279 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 H3BSA7 217 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 OR1I1O60431 355 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ADAMTS4O75173 837 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ITPKAP23677 461 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ARNTP27540 789 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 PSMB9P28065 219 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 NSG1P42857 185 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 EEFSECP57772 596 aaKnown RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 CACNG1Q06432 222 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 PGS1Q32NB8 556 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZCCHC8Q6NZY4 707 aaKnown RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 Q6ZVL8 140 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 SPATA19Q7Z5L4 167 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 RASAL3Q86YV0 1011 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 EID3Q8N140 333 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 AADATQ8N5Z0 425 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 BPIFB6Q8NFQ5 453 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 CD99L2Q8TCZ2 262 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ELMO1Q92556 727 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 CLP1Q92989 425 aaKnown RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 GPR78Q96P69 363 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 CORO1BQ9BR76 489 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ACAT2Q9BWD1 397 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 C1orf109Q9NX04 203 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZDHHC7Q9NXF8 308 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 GNPTGQ9UJJ9 305 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 HTRA2O43464 458 aaPredicted RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 RSL1D1O76021 490 aaKnown RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 CST1P01037 141 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ENO2P09104 434 aaPredicted RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 G6PDP11413 515 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 CYP2A7P20853 494 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 PPM1AP35813 382 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ATP6V1E1P36543 226 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 MERTKQ12866 999 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 CHIT1Q13231 466 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 NAE1Q13564 534 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 RFX4Q33E94 735 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 CWF19L1Q69YN2 538 aaKnown RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ARHGAP22Q7Z5H3 698 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 CACUL1Q86Y37 369 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 SCML4Q8N228 414 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms