RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 LINC00854A0A1B0GVQ3 168 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 A0A1W2PQ09 198 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 CTAGE15A4D2H0 777 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 MYO1GB0I1T2 1018 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 H0YCG3 227 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 K7EPI3 171 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 L7N2F9 121 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 O00370 1275 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 GMFGO60234 142 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 RTN2O75298 545 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 GJB3O75712 270 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 ZNF432O94892 652 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 CAMTA2O94983 1202 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 IPO7O95373 1038 aaKnown RBP2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 STAMBPO95630 424 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 F9P00740 461 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 FYNP06241 537 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 SPARCP09486 303 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 CCDC172P0C7W6 258 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 CTAGE8P0CG41 777 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 HSPA5P11021 654 aaKnown RBP2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 PDHBP11177 359 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 UBL4AP11441 157 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 PRG2P13727 222 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 TMEM11P17152 192 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 PAX7P23759 505 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 MAPK4P31152 587 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 TTKP33981 857 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 USP8P40818 1118 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 EPS15P42566 896 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 ACAA2P42765 397 aaKnown RBP2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 PTPN9P43378 593 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 HARS2P49590 506 aaKnown RBP2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 LIG4P49917 911 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 HNMTP50135 292 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 PDLIM4P50479 330 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 LUMP51884 338 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 HAND2P61296 217 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 YWHAZP63104 245 aaKnown RBP2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 PRAMEP78395 509 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 COG7P83436 770 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 GABPB1Q06547 395 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 TBL3Q12788 808 aaKnown RBP2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 IKQ13123 557 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 DCTN2Q13561 401 aaKnown RBP2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 TNFAIP1Q13829 316 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 CAMK1Q14012 370 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 WDR43Q15061 677 aaKnown RBP eCLIP2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 ZRSR1Q15695 479 aaKnown RBP2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 SLC18A3Q16572 532 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 CALCRLQ16602 461 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 NFIL3Q16649 462 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 TYSND1Q2T9J0 566 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 ZNF718Q3SXZ3 478 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 ZNF805Q5CZA5 627 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 BSPRYQ5W0U4 402 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 CAVIN1Q6NZI2 390 aaKnown RBP2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 MIER3Q7Z3K6 550 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 ADGRA1Q86SQ6 560 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 CTAGE6Q86UF2 777 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 MON1AQ86VX9 555 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 DNAAF5Q86Y56 855 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 CTAGE4Q8IX94 777 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 MB21D2Q8IYB1 491 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 FRMD1Q8N878 549 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 DRAXINQ8NBI3 349 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 NEXN-AS1Q8NBZ9 246 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 OR6J1Q8NGC5 347 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 ZCCHC10Q8TBK6 192 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 KCNG4Q8TDN1 519 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 RAB40AQ8WXH6 277 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 SAAL1Q96ER3 474 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 GIMAP5Q96F15 307 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 COG3Q96JB2 828 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 FAM81BQ96LP2 452 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 RMDN2Q96LZ7 410 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 CEP295NLQ96MC4 621 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 LRFN5Q96NI6 719 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 ZNF385AQ96PM9 386 aaKnown RBP2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 PRAM1Q96QH2 718 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 OR1F2PQ96R84 312 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 CD180Q99467 661 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 FERMT1Q9BQL6 677 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 LRRCC1Q9C099 1032 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 NYXQ9GZU5 481 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 YY1AP1Q9H869 796 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 KAT14Q9H8E8 782 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 BRF2Q9HAW0 419 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 PPP1R14DQ9NXH3 145 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 EHD2Q9NZN4 543 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 NLKQ9UBE8 527 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 LIMA1Q9UHB6 759 aaKnown RBP2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 CPSF3Q9UKF6 684 aaKnown RBP2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 MTUS1Q9ULD2 1270 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 LIPT1Q9Y234 373 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 PIN4Q9Y237 131 aaKnown RBP2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 DNAJC16Q9Y2G8 782 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 PIAS3Q9Y6X2 628 aa2.61□□□□□ -1.99
HMGB1P24-202ENST00000615653 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms