RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 DHCR24Q15392 516 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 TRMT5Q32P41 509 aaKnown RBP9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 CST9Q5W186 159 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 C16orf87Q6PH81 154 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 APTXQ7Z2E3 356 aaKnown RBP9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 P4HA3Q7Z4N8 544 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 OSTM1Q86WC4 334 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 TMEM145Q8NBT3 493 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 CEP76Q8TAP6 659 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 KCTD4Q8WVF5 259 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 B3GALT6Q96L58 329 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 CASD1Q96PB1 797 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 C9orf16Q9BUW7 83 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 KCNH6Q9H252 994 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 TMEM245Q9H330 911 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 NMUR1Q9HB89 426 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 LRTM1Q9HBL6 345 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 TFR2Q9UP52 801 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 DUXAA6NLW8 204 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 KIAA0355O15063 1070 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 SNRPB2P08579 225 aaKnown RBP9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 HNF4AP41235 474 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 PRKAG1P54619 331 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 MLLT6P55198 1093 aaPredicted RBP9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 IFI35P80217 286 aaPredicted RBP9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 TRAF2Q12933 501 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 CCINQ13939 588 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 AMZ1Q400G9 498 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 TBCELQ5QJ74 424 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 RNASEH2BQ5TBB1 312 aaKnown RBP9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 KLHDC10Q6PID8 442 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 RANBP3LQ86VV4 465 aaPredicted RBP9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 DEPDC4Q8N2C3 294 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 CYB5D2Q8WUJ1 264 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 KLHL6Q8WZ60 621 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 TFAP2BQ92481 460 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 PEX13Q92968 403 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 TOP1MTQ969P6 601 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 CCDC28BQ9BUN5 200 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 LOC100653049A0A140TA62 436 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 PRORSD1PA6NEY8 169 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 LDLRP01130 860 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 UNGP13051 313 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 PTPN4P29074 926 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 SERPINB3P29508 390 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 GATMP50440 423 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 ITGA1P56199 1179 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 TBL3Q12788 808 aaKnown RBP9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 PRKG2Q13237 762 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 ELAVL3Q14576 367 aaKnown RBP9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 FAM214AQ32MH5 1076 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 FAM129CQ86XR2 697 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 TMEM126BQ8IUX1 230 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 LRRC34Q8IZ02 419 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 UBR7Q8N806 425 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 FAM46DQ8NEK8 389 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 CMTM7Q96FZ5 175 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 TRMT2BQ96GJ1 504 aaKnown RBP9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 C8orf4Q9NR00 106 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 BUD23O43709 281 aaKnown RBP9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 S100GP29377 79 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 NAE1Q13564 534 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 CYTH1Q15438 398 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 PLEKHS1Q5SXH7 462 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 PAOXQ6QHF9 649 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 C12orf40Q86WS4 652 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 NUDT13Q86X67 352 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 CIR1Q86X95 450 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 RGMAQ96B86 450 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 CRELD1Q96HD1 420 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 DDX18Q9NVP1 670 aaKnown RBP9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 MYADML2A6NDP7 307 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 CRHR1P34998 444 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 MTAPQ13126 283 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 SEMA5AQ13591 1074 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 SLC9A5Q14940 896 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 LYSMD4Q5XG99 296 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 JAZF1Q86VZ6 243 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 ZC3H7AQ8IWR0 971 aaKnown RBP9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 NR4A3Q92570 626 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 PIGKQ92643 395 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 MRPL38Q96DV4 380 aaKnown RBP9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 TTYH1Q9H313 450 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 FETUBQ9UGM5 382 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 LIMD1Q9UGP4 676 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 SRRM3A6NNA2 597 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 DDX3YO15523 660 aaKnown RBP9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 TFPIP10646 304 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 SLC6A2P23975 617 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 CXCL12P48061 93 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 RALGDSQ12967 914 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 TRIM32Q13049 653 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 PLEKHG6Q3KR16 790 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 ZYG11AQ6WRX3 759 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 DCUN1D3Q8IWE4 304 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 MREGQ8N565 214 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 TRPV3Q8NET8 790 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 GPR21Q99679 349 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 SEMA4AQ9H3S1 761 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 POPDC3Q9HBV1 291 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms