RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 STN1Q9H668 368 aaKnown RBP13.05□□□□□ -0.32
MDC1-209ENST00000613547 PPANQ9NQ55 473 aaKnown RBP13.05□□□□□ -0.32
MDC1-209ENST00000613547 SPATS2LQ9NUQ6 558 aaKnown RBP13.05□□□□□ -0.32
MDC1-209ENST00000613547 INTS10Q9NVR2 710 aaKnown RBP13.05□□□□□ -0.32
MDC1-209ENST00000613547 SLC23A2Q9UGH3 650 aa13.05□□□□□ -0.32
MDC1-209ENST00000613547 DMGDHQ9UI17 866 aaKnown RBP13.05□□□□□ -0.32
MDC1-209ENST00000613547 APOBEC2Q9Y235 224 aaKnown RBP13.05□□□□□ -0.32
MDC1-209ENST00000613547 DNAJC16Q9Y2G8 782 aa13.05□□□□□ -0.32
MDC1-209ENST00000613547 PLEKHM1Q9Y4G2 1056 aa13.05□□□□□ -0.32
MDC1-209ENST00000613547 PCYT1BQ9Y5K3 369 aaPredicted RBP13.05□□□□□ -0.32
MDC1-209ENST00000613547 KIR2DS5A0A0G2JLQ3 304 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 A0A0G2JNG1 304 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 C17orf113A0A1B0GUU1 675 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 UBA6A0AVT1 1052 aaPredicted RBP13.04□□□□□ -0.32
MDC1-209ENST00000613547 OR5K4A6NMS3 321 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 KIR2DS3K7RE56 304 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 RHOXF2BP0C7M4 288 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 CKMT1AP12532 417 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 PBLDP30039 288 aaPredicted RBP13.04□□□□□ -0.32
MDC1-209ENST00000613547 DMPKQ09013 629 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 SEMA3AQ14563 771 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 KIR2DS5Q14953 304 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 TRADDQ15628 312 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 SMAD1Q15797 465 aaKnown RBP13.04□□□□□ -0.32
MDC1-209ENST00000613547 TYSND1Q2T9J0 566 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 C14orf28Q4W4Y0 310 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 HSP90AA5PQ58FG0 334 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 TEX35Q5T0J7 233 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 PTRHD1Q6GMV3 140 aaKnown RBP13.04□□□□□ -0.32
MDC1-209ENST00000613547 OGFOD3Q6PK18 319 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 UNC5AQ6ZN44 842 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 MICALCLQ6ZW33 695 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 LDB1Q86U70 411 aaPredicted RBP13.04□□□□□ -0.32
MDC1-209ENST00000613547 CILP2Q8IUL8 1156 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 IGDCC3Q8IVU1 814 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 SLC35F3Q8IY50 421 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 BEND7Q8N7W2 519 aaPredicted RBP13.04□□□□□ -0.32
MDC1-209ENST00000613547 KYQ8NBH2 561 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 OR2L2Q8NH16 312 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 GSDMBQ8TAX9 411 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 RHOXF2Q9BQY4 288 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 CCM2Q9BSQ5 444 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 GNPTGQ9UJJ9 305 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 PADI4Q9UM07 663 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 PCDHB1Q9Y5F3 818 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 ST14Q9Y5Y6 855 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 CABIN1Q9Y6J0 2220 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 TMEM131Q92545 1883 aa13.04□□□□□ -0.32
MDC1-209ENST00000613547 ZNF106Q9H2Y7 1883 aaKnown RBP13.04□□□□□ -0.32
MDC1-209ENST00000613547 CPED1A4D0V7 1026 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 H3BMM5 538 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 ZW10O43264 779 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 OR1I1O60431 355 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 GSTA2P09210 222 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 CDK4P11802 303 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 F3P13726 295 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 RPS3P23396 243 aaKnown RBP eCLIP13.03□□□□□ -0.32
MDC1-209ENST00000613547 ACP1P24666 158 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 EIF3BP55884 814 aaKnown RBP13.03□□□□□ -0.32
MDC1-209ENST00000613547 ILKQ13418 452 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 FRG1Q14331 258 aaKnown RBP13.03□□□□□ -0.32
MDC1-209ENST00000613547 FASTKD3Q14CZ7 662 aaKnown RBP13.03□□□□□ -0.32
MDC1-209ENST00000613547 SYTL3Q4VX76 610 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 PPM1JQ5JR12 505 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 STEAP4Q687X5 459 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 DGLUCYQ7Z3D6 616 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 GPR156Q8NFN8 814 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 MAPK15Q8TD08 544 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 NAT14Q8WUY8 206 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 PANX3Q96QZ0 392 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 FMO2Q99518 471 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 CCDC68Q9H2F9 335 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 IARS2Q9NSE4 1012 aaKnown RBP13.03□□□□□ -0.32
MDC1-209ENST00000613547 ZDHHC18Q9NUE0 388 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 IL1RAPL1Q9NZN1 696 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 FAM8A1Q9UBU6 413 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 TBC1D29Q9UFV1 150 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 FBXO5Q9UKT4 447 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 ACSL5Q9ULC5 683 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 PCDHGA1Q9Y5H4 931 aa13.03□□□□□ -0.32
MDC1-209ENST00000613547 SPAARA0A1B0GVQ0 90 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 EME2A4GXA9 379 aaPredicted RBP13.02□□□□□ -0.33
MDC1-209ENST00000613547 PRR19A6NJB7 356 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 BHMG1C9JSJ3 638 aaPredicted RBP13.02□□□□□ -0.33
MDC1-209ENST00000613547 KPNA5O15131 536 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 SGTAO43765 313 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 NOBOXO60393 691 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 SPAG6O75602 509 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 ESR1P03372 595 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 GP1BAP07359 652 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 SLC35G4P0C7Q5 338 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 ERVK-10P10266 1014 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 SLC1A2P43004 574 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 MAGEA4P43358 317 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 ADARP55265 1226 aaKnown RBP13.02□□□□□ -0.33
MDC1-209ENST00000613547 PLOD1Q02809 727 aaPredicted RBP13.02□□□□□ -0.33
MDC1-209ENST00000613547 RPA4Q13156 261 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 DNAJC3Q13217 504 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 CTBP1Q13363 440 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 NFE2L1Q14494 772 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms