RNA–Protein interactions for RNA: ENST00000613098.4

PPARGC1A-217, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1A, Length 3,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-217ENST00000613098 CD47Q08722 323 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 PPP1R8Q12972 351 aaKnown RBP7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 SPIDRQ14159 915 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 MAP7D1Q3KQU3 841 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 RFTN2Q52LD8 501 aaPredicted RBP7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 SLC44A4Q53GD3 710 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 ALG1LQ6GMV1 187 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 MRPL10Q7Z7H8 261 aaKnown RBP7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 TLK2Q86UE8 772 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 OR4L1Q8NH43 312 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 BRI3BPQ8WY22 251 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 ITCHQ96J02 903 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 PPM1MQ96MI6 270 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 ZNF641Q96N77 438 aaPredicted RBP7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 HBEGFQ99075 208 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 PALMDQ9NP74 551 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 HEBP1Q9NRV9 189 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.35□□□□□ -1.233e-6■■■□□ 15.6
PPARGC1A-217ENST00000613098 CHD5Q8TDI0 1954 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 LAMA3Q16787 3333 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 FAM234BA2RU67 622 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 NCF1BA6NI72 391 aaPredicted RBP7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 DRGXA6NNA5 263 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 NCF1CA8MVU1 366 aaPredicted RBP7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 ARNTLO00327 626 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 OR7A17O14581 309 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 GPR39O43194 453 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 UGT2B11O75310 529 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 RPP40O75818 363 aaKnown RBP7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 OR4F21O95013 312 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 POMCP01189 267 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 UROSP10746 265 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 G6PDP11413 515 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 NCF1P14598 390 aaPredicted RBP7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 RHOQP17081 205 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 PCSK1P29120 753 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 ERVK-8P63133 956 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 SERINC3Q13530 473 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 TUBA3CQ13748 450 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 NR1D2Q14995 579 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 C6orf141Q5SZD1 244 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 EGFLAMQ63HQ2 1017 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 NADSYN1Q6IA69 706 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 SULT1C3Q6IMI6 304 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 NIPAL1Q6NVV3 410 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 NCCRP1Q6ZVX7 275 aaPredicted RBP7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 ZNF551Q7Z340 670 aaPredicted RBP7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 DPP9Q86TI2 863 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 MFSD4AQ8N468 514 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 FBXO39Q8N4B4 442 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 ZNF548Q8NEK5 533 aaPredicted RBP7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 DDHD1Q8NEL9 900 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 BRSK1Q8TDC3 778 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 BLOC1S5Q8TDH9 187 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 FRS2Q8WU20 508 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 BARD1Q99728 777 aaKnown RBP7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 SEMA3CQ99985 751 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 MROQ9BYG7 248 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 TNKS2Q9H2K2 1166 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 VNN3Q9NY84 501 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 ZIM2Q9NZV7 527 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 FNIP2Q9P278 1114 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 AASSQ9UDR5 926 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 LEF1Q9UJU2 399 aaPredicted RBP7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 INVSQ9Y283 1065 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 TLR6Q9Y2C9 796 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 KRBA1A5PL33 1030 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 MOXD2PA6NHM9 499 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 STX16O14662 325 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 DFNA5O60443 496 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 MLYCDO95822 493 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 THRBP10828 461 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 HOXB9P17482 250 aaPredicted RBP7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 FMO4P31512 558 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 HALP42357 657 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 KCNK10P57789 538 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 RAB15P59190 212 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 ITKQ08881 620 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 MGAT3Q09327 533 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 GBX1Q14549 363 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 CCL14Q16627 93 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 PSAPL1Q6NUJ1 521 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 THAP5Q7Z6K1 395 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 PROSER1Q86XN7 944 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 TTC9BQ8N6N2 239 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 STAG3L4Q8TBR4 150 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 CD200R1Q8TD46 325 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 EEF1AKMT1Q8WVE0 214 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 HDAC2Q92769 488 aaKnown RBP7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 PEX13Q92968 403 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 ERLEC1Q96DZ1 483 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 CGREF1Q99674 301 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 GPR21Q99679 349 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 RHNO1Q9BSD3 238 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 FEM1AQ9BSK4 669 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 GORASP2Q9H8Y8 452 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 EXD2Q9NVH0 621 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 TRNAU1APQ9NX07 287 aaKnown RBP7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 ENPP5Q9UJA9 477 aa7.35□□□□□ -1.23
PPARGC1A-217ENST00000613098 DGKBQ9Y6T7 804 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms