RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 SH3GL1Q99961 368 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 FZD3Q9NPG1 666 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 RAD18Q9NS91 495 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 RAB26Q9ULW5 256 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 SPAG6O75602 509 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 CLDN7O95471 211 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 HTR1BP28222 390 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 GPC1P35052 558 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 CDKL1Q00532 357 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 KIAA0319Q5VV43 1072 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 FAM46CQ5VWP2 391 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 ATG14Q6ZNE5 492 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 Q6ZVL8 140 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 MRPL43Q8N983 215 aaKnown RBP10.73□□□□□ -0.69
FAM3A-221ENST00000612856 OR4L1Q8NH43 312 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 NPY6RQ99463 290 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 EFCAB1Q9HAE3 211 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 MAP10Q9P2G4 905 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 ZNF318Q5VUA4 2279 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 A0A0C4DFX4 3053 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 SYCE1LA8MT33 242 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 C9JVG2 144 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 TMX2-CTNND1H3BSU7 103 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 INSIG1O15503 277 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 LATO43561 262 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 STC2O76061 302 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 MT-ND1P03886 318 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 ARSAP15289 507 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 RFC2P35250 354 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 KLF10Q13118 480 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 C1orf61Q13536 156 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 PKN3Q6P5Z2 889 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 TAF8Q7Z7C8 310 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 RIN3Q8TB24 985 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 TRPC4APQ8TEL6 797 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 IRF7Q92985 503 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 PYCR2Q96C36 320 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 DACH2Q96NX9 599 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 EBNA1BP2Q99848 306 aaKnown RBP10.73□□□□□ -0.69
FAM3A-221ENST00000612856 FAM83DQ9H4H8 585 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 MTRRQ9UBK8 725 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 KLQ9UEF7 1012 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 SCML2Q9UQR0 700 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 A0A0G2JN53 185 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 NOTOA8MTQ0 251 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 CXorf49A8MYA2 514 aaPredicted RBP10.73□□□□□ -0.69
FAM3A-221ENST00000612856 BHMG1C9JSJ3 638 aaPredicted RBP10.73□□□□□ -0.69
FAM3A-221ENST00000612856 PTGES3LE9PB15 166 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 CD3EAPO15446 510 aaKnown RBP10.73□□□□□ -0.69
FAM3A-221ENST00000612856 ZBTB14O43829 449 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 CPSF4O95639 269 aaKnown RBP10.73□□□□□ -0.69
FAM3A-221ENST00000612856 ITGAVP06756 1048 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 BPGMP07738 259 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 COL6A1P12109 1028 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 CST5P28325 142 aaPredicted RBP10.73□□□□□ -0.69
FAM3A-221ENST00000612856 ALDH4A1P30038 563 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 NPY2RP49146 381 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 CDK9P50750 372 aaKnown RBP10.73□□□□□ -0.69
FAM3A-221ENST00000612856 YBEYP58557 167 aaPredicted RBP10.73□□□□□ -0.69
FAM3A-221ENST00000612856 IL2P60568 153 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 ADGRE1Q14246 886 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 TRIM25Q14258 630 aaKnown RBP10.73□□□□□ -0.69
FAM3A-221ENST00000612856 FGD3Q5JSP0 725 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 IGDCC3Q8IVU1 814 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 SLC15A3Q8IY34 581 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 CMTR2Q8IYT2 770 aaKnown RBP10.73□□□□□ -0.69
FAM3A-221ENST00000612856 DSELQ8IZU8 1212 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 STK40Q8N2I9 435 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 CELF5Q8N6W0 485 aaKnown RBP10.73□□□□□ -0.69
FAM3A-221ENST00000612856 MCOLN3Q8TDD5 553 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 DCAKDQ8WVC6 231 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 FRMD8Q9BZ67 464 aaPredicted RBP10.73□□□□□ -0.69
FAM3A-221ENST00000612856 STN1Q9H668 368 aaKnown RBP10.73□□□□□ -0.69
FAM3A-221ENST00000612856 POLE4Q9NR33 117 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 SLC2A6Q9UGQ3 507 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 BTRCQ9Y297 605 aa10.73□□□□□ -0.69
FAM3A-221ENST00000612856 TTC3P53804 2025 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 CROCCQ5TZA2 2017 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 NTRK1P04629 796 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 CEBPBP17676 345 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 SEPHS1P49903 392 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 NDST2P52849 883 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 PWP1Q13610 501 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 IL23RQ5VWK5 629 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 NCBP2-AS2Q69YL0 99 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 RSPO2Q6UXX9 243 aaPredicted RBP10.72□□□□□ -0.69
FAM3A-221ENST00000612856 CCDC81Q6ZN84 652 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 LYSMD3Q7Z3D4 306 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 APCDD1Q8J025 514 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 DEFB123Q8N688 67 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 CDYL2Q8N8U2 506 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 IRGQQ8WZA9 623 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 DHRS1Q96LJ7 313 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 C8orf48Q96LL4 319 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 NSMCE3Q96MG7 304 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 SLC46A2Q9BY10 475 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 OR2AG1Q9H205 316 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 RUBCNLQ9H714 662 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 ABCB10Q9NRK6 738 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 ZNF358Q9NW07 568 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms