RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 NDST3O95803 873 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 HMOX2P30519 316 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 SLC6A4P31645 630 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 SGSHP51688 502 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 TUBA4AP68366 448 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 IL10RBQ08334 325 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 PRMT9Q6P2P2 845 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 HACD2Q6Y1H2 254 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 TMEM199Q8N511 208 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 C2orf69Q8N8R5 385 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 ZNF599Q96NL3 588 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 PPP1R2P1Q96PQ5 205 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 BDH2Q9BUT1 245 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 CARS2Q9HA77 564 aaKnown RBP13.88□□□□□ -0.19
COL6A1-207ENST00000612273 VAPAQ9P0L0 249 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 ANGPTL3Q9Y5C1 460 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 PLXNB2O15031 1838 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 C2orf81A6NN90 581 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 MYCP01106 439 aaPredicted RBP13.88□□□□□ -0.19
COL6A1-207ENST00000612273 PKMP14618 531 aaKnown RBP13.88□□□□□ -0.19
COL6A1-207ENST00000612273 EFNA1P20827 205 aaPredicted RBP13.88□□□□□ -0.19
COL6A1-207ENST00000612273 TACR2P21452 398 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 FSHRP23945 695 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 CHRNB3Q05901 458 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 ABRAXAS2Q15018 415 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 TGFBIQ15582 683 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 FAM174BQ3ZCQ3 159 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 PERM1Q5SV97 790 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 FAM151BQ6UXP7 276 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 TRIM74Q86UV6 250 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 TRIM73Q86UV7 250 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 MFSD2AQ8NA29 543 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 OR56A4Q8NGH8 313 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 TSPAN18Q96SJ8 248 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 GPR62Q9BZJ7 368 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 HIPK3Q9H422 1215 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 IKZF5Q9H5V7 419 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 SCUBE2Q9NQ36 999 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 PCDHB5Q9Y5E4 795 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 CORINQ9Y5Q5 1042 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 H0YJX3 145 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 HS6ST1O60243 411 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 DIRAS1O95057 198 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 GJB5O95377 273 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 CYP11A1P05108 521 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 GPIP06744 558 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 DGCR6Q14129 220 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 ATXN7L2Q5T6C5 722 aaPredicted RBP13.88□□□□□ -0.19
COL6A1-207ENST00000612273 R3HCC1LQ7Z5L2 792 aaKnown RBP13.88□□□□□ -0.19
COL6A1-207ENST00000612273 SAPCD2Q86UD0 394 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 CCDC117Q8IWD4 279 aaPredicted RBP13.88□□□□□ -0.19
COL6A1-207ENST00000612273 OR4F6Q8NGB9 312 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 TOR3AQ9H497 397 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 CHCHD3Q9NX63 227 aaKnown RBP13.88□□□□□ -0.19
COL6A1-207ENST00000612273 PCDH10Q9P2E7 1040 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 KLQ9UEF7 1012 aa13.88□□□□□ -0.19
COL6A1-207ENST00000612273 PRAMEF11O60813 436 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 LRATO95237 230 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 WISP3O95389 354 aaPredicted RBP13.87□□□□□ -0.19
COL6A1-207ENST00000612273 CST1P01037 141 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 BMXP51813 675 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 CYP20A1Q6UW02 462 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 CCDC81Q6ZN84 652 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 SERINC5Q86VE9 423 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 LRRC49Q8IUZ0 686 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 TBC1D21Q8IYX1 336 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 ZNF683Q8IZ20 524 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 C1orf74Q96LT6 269 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 MYOCQ99972 504 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 BOCQ9BWV1 1114 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 TRIM54Q9BYV2 358 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 FBXO44Q9H4M3 255 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 TBC1D23Q9NUY8 699 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.87□□□□□ -0.19
COL6A1-207ENST00000612273 UBA2Q9UBT2 640 aaPredicted RBP13.87□□□□□ -0.19
COL6A1-207ENST00000612273 SCML2Q9UQR0 700 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 LCHNA4D1U4 455 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 FAM155AB1AL88 458 aaPredicted RBP13.87□□□□□ -0.19
COL6A1-207ENST00000612273 XPNPEP2O43895 674 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 UROSP10746 265 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 PIGAP37287 484 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 ATP4BP51164 291 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 ARSFP54793 590 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 OXCT1P55809 520 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 RSPO2Q6UXX9 243 aaPredicted RBP13.87□□□□□ -0.19
COL6A1-207ENST00000612273 UTS2BQ765I0 119 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 ZDHHC13Q8IUH4 622 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 FRS2Q8WU20 508 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 GLT1D1Q96MS3 346 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 BIRC8Q96P09 236 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 BEGAINQ9BUH8 593 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 IPPKQ9H8X2 491 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 SLC52A3Q9NQ40 469 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 PRDM8Q9NQV8 689 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 LATS2Q9NRM7 1088 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 MRGBPQ9NV56 204 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 SELENONQ9NZV5 590 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 RAI2Q9Y5P3 530 aa13.87□□□□□ -0.19
COL6A1-207ENST00000612273 TCRBV5S2A0A599 114 aa13.86□□□□□ -0.19
COL6A1-207ENST00000612273 SYCE1LA8MT33 242 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms