RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 RGSL1A5PLK6 1076 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 H3BMM5 538 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 TSPAN6O43657 245 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 SGTAO43765 313 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 CCDC166P0CW27 439 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 ZNF7P17097 686 aaPredicted RBP17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 RPS3P23396 243 aaKnown RBP eCLIP17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 RAET1GQ6H3X3 334 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 RINLQ6ZS11 566 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 TMEM151AQ8N4L1 468 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 DDHD1Q8NEL9 900 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 GLYATL1Q969I3 302 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 TSPAN17Q96FV3 270 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 NAF1Q96HR8 494 aaKnown RBP17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 UBXN10Q96LJ8 280 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 DCLRE1BQ9H816 532 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 MBNL1Q9NR56 388 aaKnown RBP17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 KCNK4Q9NYG8 393 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 A0A1W2PQU0 124 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 GYG2O15488 501 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 PCCBP05166 539 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 C7P10643 843 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 MAT2AP31153 395 aaKnown RBP17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 AKT1P31749 480 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 ACSL1P33121 698 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 TPMTP51580 245 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 CLCN7P51798 805 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 BST1Q10588 318 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 PDAP1Q13442 181 aaKnown RBP17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 WSCD2Q2TBF2 565 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 CMPK2Q5EBM0 449 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 ATG16L1Q676U5 607 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 PTRHD1Q6GMV3 140 aaKnown RBP17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 ANO7Q6IWH7 933 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 ZNF765Q7L2R6 523 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 BTN2A2Q8WVV5 523 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 KCNJ9Q92806 393 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 ULK4Q96C45 1275 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 FZD3Q9NPG1 666 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 CPSF2Q9P2I0 782 aaKnown RBP17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 XPR1Q9UBH6 696 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 ANKRD6Q9Y2G4 727 aa17.11■□□□□ 0.33
PPFIA3-207ENST00000602716 A0A087X1B8 175 aa17.1■□□□□ 0.33
PPFIA3-207ENST00000602716 H0Y3Z8 333 aa17.1■□□□□ 0.33
PPFIA3-207ENST00000602716 LIN7AO14910 233 aaPredicted RBP17.1■□□□□ 0.33
PPFIA3-207ENST00000602716 RAD51BO15315 384 aa17.1■□□□□ 0.33
PPFIA3-207ENST00000602716 KIF1CO43896 1103 aaKnown RBP17.1■□□□□ 0.33
PPFIA3-207ENST00000602716 KLHL2O95198 593 aa17.1■□□□□ 0.33
PPFIA3-207ENST00000602716 PTDSS1P48651 473 aaKnown RBP17.1■□□□□ 0.33
PPFIA3-207ENST00000602716 OCRLQ01968 901 aa17.1■□□□□ 0.33
PPFIA3-207ENST00000602716 TMEM259Q4ZIN3 620 aa17.1■□□□□ 0.33
PPFIA3-207ENST00000602716 LRRC8EQ6NSJ5 796 aa17.1■□□□□ 0.33
PPFIA3-207ENST00000602716 CPNE9Q8IYJ1 553 aa17.1■□□□□ 0.33
PPFIA3-207ENST00000602716 VPS35Q96QK1 796 aa17.1■□□□□ 0.33
PPFIA3-207ENST00000602716 NMUR2Q9GZQ4 415 aa17.1■□□□□ 0.33
PPFIA3-207ENST00000602716 RAD18Q9NS91 495 aa17.1■□□□□ 0.33
PPFIA3-207ENST00000602716 TAS2R13Q9NYV9 303 aa17.1■□□□□ 0.33
PPFIA3-207ENST00000602716 DCDC2Q9UHG0 476 aa17.1■□□□□ 0.33
PPFIA3-207ENST00000602716 GNPTGQ9UJJ9 305 aa17.1■□□□□ 0.33
PPFIA3-207ENST00000602716 RUVBL2Q9Y230 463 aaKnown RBP17.1■□□□□ 0.33
PPFIA3-207ENST00000602716 CHURC1-FNTBB4DL54 471 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 PFDN6O15212 129 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 RNGTTO60942 597 aaKnown RBP17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 TM7SF2O76062 418 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 TSPAN12O95859 305 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 ESRRAP11474 423 aaPredicted RBP17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 CHRM3P20309 590 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 GPR1P46091 355 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 CTSCP53634 463 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 PCLAFQ15004 111 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 LYPLAL1Q5VWZ2 237 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 SYT13Q7L8C5 426 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 ALYREFQ86V81 257 aaKnown RBP17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 FSTL5Q8N475 847 aaPredicted RBP17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 BEND7Q8N7W2 519 aaPredicted RBP17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 RAB3IL1Q8TBN0 382 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 DTX3LQ8TDB6 740 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 PTERQ96BW5 349 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 SGF29Q96ES7 293 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 LENG8Q96PV6 779 aaPredicted RBP17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 MYOCQ99972 504 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 CDH19Q9H159 772 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 MMADHCQ9H3L0 296 aaPredicted RBP17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 TAS2R1Q9NYW7 299 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 PCDHB1Q9Y5F3 818 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 OR2AG2A6NM03 316 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 ZBTB14O43829 449 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 VPS26AO75436 327 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 TRIM16O95361 564 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 ACADMP11310 421 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 KCNA4P22459 653 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 NSG1P42857 185 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 DPTQ07507 201 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 BLMHQ13867 455 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 LRRC32Q14392 662 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 IRF4Q15306 451 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 CHI3L2Q15782 390 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 INSCQ1MX18 579 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 KYAT3Q6YP21 454 aaKnown RBP17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 MACC1Q6ZN28 852 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms