RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 SPOCD1Q6ZMY3 1216 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 PID1Q7Z2X4 250 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 GLT6D1Q7Z4J2 308 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 ZC3H18Q86VM9 953 aaKnown RBP12.9□□□□□ -0.34
RPS28-204ENST00000602140 AMZ2Q86W34 360 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 VSTM4Q8IW00 320 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 RASGEF1AQ8N9B8 481 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 GPR150Q8NGU9 434 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 BLOC1S5Q8TDH9 187 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 MRGPRX2Q96LB1 330 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 ZCCHC2Q9C0B9 1178 aaKnown RBP12.9□□□□□ -0.34
RPS28-204ENST00000602140 RAB33BQ9H082 229 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.9□□□□□ -0.34
RPS28-204ENST00000602140 IL17CQ9P0M4 197 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 KLHL8Q9P2G9 620 aaPredicted RBP12.9□□□□□ -0.34
RPS28-204ENST00000602140 PSMD13Q9UNM6 376 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 KCNMB2Q9Y691 235 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 ZNF106Q9H2Y7 1883 aaKnown RBP12.9□□□□□ -0.34
RPS28-204ENST00000602140 MAST4O15021 2626 aa12.9□□□□□ -0.35
RPS28-204ENST00000602140 FLNCQ14315 2725 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 IGHV5-51A0A0C4DH38 117 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 GLYATL1P3A0A0U1RQE8 302 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 OR2AG2A6NM03 316 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 MTSS1O43312 755 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 KCNJ13O60928 360 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 CCNYL3P0C7X3 344 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 FECHP22830 423 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 PBLDP30039 288 aaPredicted RBP12.89□□□□□ -0.35
RPS28-204ENST00000602140 CA5AP35218 305 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 FOXK1P85037 733 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 DMPKQ09013 629 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 TCEAL1Q15170 157 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 SLC1A5Q15758 541 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 RPE65Q16518 533 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.89□□□□□ -0.35
RPS28-204ENST00000602140 LDLRAP1Q5SW96 308 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 GPRC6AQ5T6X5 926 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 TMEM220Q6QAJ8 160 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 FAM83HQ6ZRV2 1179 aaPredicted RBP12.89□□□□□ -0.35
RPS28-204ENST00000602140 PPP1R3BQ86XI6 285 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 ZNF567Q8N184 647 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 SIDT2Q8NBJ9 832 aaKnown RBP12.89□□□□□ -0.35
RPS28-204ENST00000602140 DDHD1Q8NEL9 900 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 IPMKQ8NFU5 416 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 DTX3LQ8TDB6 740 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 P3H4Q92791 437 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 HAUS1Q96CS2 278 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 OXNAD1Q96HP4 312 aaPredicted RBP12.89□□□□□ -0.35
RPS28-204ENST00000602140 FCRL5Q96RD9 977 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 HACD3Q9P035 362 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 KCND3Q9UK17 655 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 PADI1Q9ULC6 663 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 INTUQ9ULD6 942 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 PKP3Q9Y446 797 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 ALG6Q9Y672 507 aa12.89□□□□□ -0.35
RPS28-204ENST00000602140 GOLGA6L3A6NEY3 463 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 GAPDHSO14556 408 aaPredicted RBP12.88□□□□□ -0.35
RPS28-204ENST00000602140 PSTPIP1O43586 416 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 TIAF1O95411 115 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 FOLR1P15328 257 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 HLA-DPA1P20036 260 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 NR1D1P20393 614 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 TUBB3Q13509 450 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 ITGA9Q13797 1035 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 NFE2L1Q14494 772 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 KCNAB1Q14722 419 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 PLCL1Q15111 1095 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 TFDP3Q5H9I0 405 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 CYB5D1Q6P9G0 228 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 KLHL35Q6PF15 583 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 TMEM135Q86UB9 458 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 UBXN4Q92575 508 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 VAT1Q99536 393 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 MAP3K3Q99759 626 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 GOLPH3Q9H4A6 298 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 PDE7BQ9NP56 450 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 IMP3Q9NV31 184 aaKnown RBP12.88□□□□□ -0.35
RPS28-204ENST00000602140 SEMA5BQ9P283 1151 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 RARRES3Q9UL19 164 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 POLHQ9Y253 713 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 TP53TG5Q9Y2B4 290 aa12.88□□□□□ -0.35
RPS28-204ENST00000602140 CFAP20Q9Y6A4 193 aaKnown RBP12.88□□□□□ -0.35
RPS28-204ENST00000602140 DNMT3AQ9Y6K1 912 aaPredicted RBP12.88□□□□□ -0.35
RPS28-204ENST00000602140 RELNP78509 3460 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 hCG_1818297A0A087WSY0 165 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 PIPSLA2A3N6 862 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 CDC14CA4D256 554 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 MKRN2OSH3BPM6 223 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 K7EM74 188 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 STX7O15400 261 aaKnown RBP12.87□□□□□ -0.35
RPS28-204ENST00000602140 CREG1O75629 220 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 ZRANB2O95218 330 aaKnown RBP eCLIP12.87□□□□□ -0.35
RPS28-204ENST00000602140 MT-ND3P03897 115 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 MSH3P20585 1137 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 MPP3Q13368 585 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 DNASE1L3Q13609 305 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 PTPRCAPQ14761 206 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 FNBP1LQ5T0N5 605 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 PWWP2BQ6NUJ5 590 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 CERS6Q6ZMG9 384 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms