RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 LYPLAL1Q5VWZ2 237 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 METRNLQ641Q3 311 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 TRMT10BQ6PF06 316 aaKnown RBP13.51□□□□□ -0.25
VRK3-219ENST00000600137 IYDQ6PHW0 289 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 ABRAXAS1Q6UWZ7 409 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 WASH2PQ6VEQ5 465 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 CILP2Q8IUL8 1156 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 CCNJLQ8IV13 435 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 ANKMY2Q8IV38 441 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 DENND6AQ8IWF6 608 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 LILRA3Q8N6C8 439 aaPredicted RBP13.51□□□□□ -0.25
VRK3-219ENST00000600137 KYQ8NBH2 561 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 FBXO36Q8NEA4 188 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 OR2L2Q8NH16 312 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 LPGAT1Q92604 370 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 BIRC8Q96P09 236 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 PHACTR1Q9C0D0 580 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 SLC32A1Q9H598 525 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 WASH6PQ9NQA3 447 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 PRDM8Q9NQV8 689 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 MOCS1Q9NZB8 636 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 FTSJ1Q9UET6 329 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 ZC3H7BQ9UGR2 993 aaKnown RBP13.51□□□□□ -0.25
VRK3-219ENST00000600137 WDR37Q9Y2I8 494 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 COL27A1Q8IZC6 1860 aaPredicted RBP13.5□□□□□ -0.25
VRK3-219ENST00000600137 C17orf113A0A1B0GUU1 675 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 AP2A2O94973 939 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 ERVK-10P10266 1014 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 ALPPL2P10696 532 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 RALBP11234 206 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 OGNP20774 298 aaKnown RBP13.5□□□□□ -0.25
VRK3-219ENST00000600137 RPS3P23396 243 aaKnown RBP eCLIP13.5□□□□□ -0.25
VRK3-219ENST00000600137 GABRB3P28472 473 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 CARSP49589 748 aaKnown RBP13.5□□□□□ -0.25
VRK3-219ENST00000600137 TTPAP49638 278 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 CTBP1Q13363 440 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 NFE2L1Q14494 772 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 HSP90AA5PQ58FG0 334 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 PERM1Q5SV97 790 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 AMZ2Q86W34 360 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 SFRP1Q8N474 314 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 ARL14Q8N4G2 192 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 ARL10Q8N8L6 244 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.5□□□□□ -0.25
VRK3-219ENST00000600137 LKAAEAR1Q8TD35 194 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 ZDHHC1Q8WTX9 485 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 SCG3Q8WXD2 468 aaKnown RBP13.5□□□□□ -0.25
VRK3-219ENST00000600137 DCUN1D1Q96GG9 259 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 TCF12Q99081 682 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 DPEP2Q9H4A9 486 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 FAM114A2Q9NRY5 505 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 C20orf96Q9NUD7 363 aaPredicted RBP13.5□□□□□ -0.25
VRK3-219ENST00000600137 RABGEF1Q9UJ41 708 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 PADI4Q9UM07 663 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 DNAJC16Q9Y2G8 782 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 MED16Q9Y2X0 877 aa13.5□□□□□ -0.25
VRK3-219ENST00000600137 CFAP99D6REC4 459 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 PRMT5O14744 637 aaPredicted RBP13.49□□□□□ -0.25
VRK3-219ENST00000600137 PPM1DO15297 605 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 F3P13726 295 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 PAMP19021 973 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 SLC19A1P41440 591 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 ADARP55265 1226 aaKnown RBP13.49□□□□□ -0.25
VRK3-219ENST00000600137 MAZP56270 477 aaKnown RBP13.49□□□□□ -0.25
VRK3-219ENST00000600137 GPX6P59796 221 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 SIM1P81133 766 aaPredicted RBP13.49□□□□□ -0.25
VRK3-219ENST00000600137 CLCA4Q14CN2 919 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 INSCQ1MX18 579 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 C14orf28Q4W4Y0 310 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 PPM1JQ5JR12 505 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 AARS2Q5JTZ9 985 aaKnown RBP13.49□□□□□ -0.25
VRK3-219ENST00000600137 CTSL3PQ5NE16 218 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 TEDDM1Q5T9Z0 273 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 AGAP9Q5VTM2 703 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 GUSBP11Q6P575 273 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 ZNF549Q6P9A3 640 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 KCNMB4Q86W47 210 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 CNTN4Q8IWV2 1026 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 ZBED8Q8IZ13 594 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.49□□□□□ -0.25
VRK3-219ENST00000600137 CCM2Q9BSQ5 444 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 FOXP3Q9BZS1 431 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 SAYSD1Q9NPB0 183 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 SMYD2Q9NRG4 433 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 SIRPGQ9P1W8 387 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 ZNF624Q9P2J8 865 aaPredicted RBP13.49□□□□□ -0.25
VRK3-219ENST00000600137 DOLKQ9UPQ8 538 aa13.49□□□□□ -0.25
VRK3-219ENST00000600137 KNTC1P50748 2209 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 UNC13CQ8NB66 2214 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 TRBV23OR9-2A0A075B6M9 112 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 PRAMEF33A0A0G2JMD5 474 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 SLC5A10A0PJK1 596 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 IQCF5A8MTL0 148 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 B4DGG1 531 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 HAUS5O94927 633 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 FTH1P19P0C7X4 201 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 RPL10P27635 214 aaKnown RBP13.48□□□□□ -0.25
VRK3-219ENST00000600137 SSTR1P30872 391 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 SLC1A2P43004 574 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 LEPRP48357 1165 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms