RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	CAPN8	A6NHC0	703 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SHOX	O15266	292 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PAGE1	O75459	146 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SERPINH1	P50454	418 aa	Known RBP	11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CYP4F2	P78329	520 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ACY1	Q03154	408 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CYP4F3	Q08477	520 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	MAFA	Q8NHW3	353 aa	Predicted RBP	11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	NT5C3B	Q969T7	300 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	NXPE3	Q969Y0	559 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	VPS33A	Q96AX1	596 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PABPC5	Q96DU9	382 aa	Known RBP	11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	NSL1	Q96IY1	281 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	EGLN2	Q96KS0	407 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	NMUR2	Q9GZQ4	415 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CD93	Q9NPY3	652 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ASXL3	Q9C0F0	2248 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	hCG_2039718	K7EN88	272 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	TGDS	O95455	350 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	AP2A1	O95782	977 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ECD	O95905	644 aa	Predicted RBP	11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	BPGM	P07738	259 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ITGA2	P17301	1181 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CD72	P21854	359 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	NR4A2	P43354	598 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	GLRB	P48167	497 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	FOLH1	Q04609	750 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	GRM2	Q14416	872 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	DLG2	Q15700	870 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	FSCB	Q5H9T9	825 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	RABGAP1L	Q5R372	815 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	NAPEPLD	Q6IQ20	393 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	KCNMB4	Q86W47	210 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ASCC1	Q8N9N2	400 aa	Known RBP	11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	OR6Y1	Q8NGX8	325 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	FCRL3	Q96P31	734 aa	Predicted RBP	11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	WWP1	Q9H0M0	922 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ELAC1	Q9H777	363 aa	Known RBP	11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	GKN1	Q9NS71	199 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	RBM22	Q9NW64	420 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	IGSF9	Q9P2J2	1179 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	LIMD1	Q9UGP4	676 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335	VCAN	P13611	3396 aa		11.22	□□□□□ -0.61
SUPT5H-216	ENST00000599335		A0A1W2PQH9	124 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335		A0A1W2PRG6	482 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	INPPL1	O15357	1258 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	NUPL2	O15504	423 aa	Known RBP	11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	BPNT1	O95861	308 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	NCF2	P19878	526 aa	Predicted RBP	11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CNTF	P26441	200 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CRHR1	P34998	444 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CHN2	P52757	468 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PGGT1B	P53609	377 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	AQP4	P55087	323 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SPANXN3	Q5MJ09	141 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ATP6V0D2	Q8N8Y2	350 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	FIG4	Q92562	907 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SUSD3	Q96L08	255 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	FICD	Q9BVA6	458 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CHID1	Q9BWS9	393 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SAV1	Q9H4B6	383 aa	Predicted RBP	11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	TOR4A	Q9NXH8	423 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PAQR5	Q9NXK6	330 aa	Predicted RBP	11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	SIRPG	Q9P1W8	387 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PPM1H	Q9ULR3	514 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	NDRG2	Q9UN36	371 aa	Known RBP	11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	THSD7B	Q9C0I4	1608 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335		H3BSA7	217 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	TP53	P04637	393 aa	Predicted RBP	11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	NELFE	P18615	380 aa	Known RBP	11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	MAGEA3	P43357	314 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	GABRE	P78334	506 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CHRNE	Q04844	493 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	LGALS3BP	Q08380	585 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	USP10	Q14694	798 aa	Known RBP	11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ARHGAP15	Q53QZ3	475 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PYHIN1	Q6K0P9	492 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	LIMS2	Q7Z4I7	341 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	JPH3	Q8WXH2	748 aa	Predicted RBP	11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ZNF486	Q96H40	463 aa	Predicted RBP	11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CATSPERB	Q9H7T0	1116 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CRLF2	Q9HC73	371 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ABCC13	Q9NSE7	274 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	EPS15L1	Q9UBC2	864 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CPNE7	Q9UBL6	633 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	ADGRE2	Q9UHX3	823 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	CLEC4A	Q9UMR7	237 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335	PCDHGA2	Q9Y5H1	932 aa		11.21	□□□□□ -0.61
SUPT5H-216	ENST00000599335		A0A096LPK6	155 aa		11.21	□□□□□ -0.62
SUPT5H-216	ENST00000599335	HMX2	A2RU54	273 aa		11.21	□□□□□ -0.62
SUPT5H-216	ENST00000599335	ZNF839	A8K0R7	811 aa		11.21	□□□□□ -0.62
SUPT5H-216	ENST00000599335	C12orf71	A8MTZ7	269 aa		11.21	□□□□□ -0.62
SUPT5H-216	ENST00000599335	MEN1	O00255	615 aa		11.21	□□□□□ -0.62
SUPT5H-216	ENST00000599335	HSPA4L	O95757	839 aa		11.21	□□□□□ -0.62
SUPT5H-216	ENST00000599335	ALDOA	P04075	364 aa	Known RBP	11.21	□□□□□ -0.62
SUPT5H-216	ENST00000599335	HMGN1	P05114	100 aa		11.21	□□□□□ -0.62
SUPT5H-216	ENST00000599335	ITIH1	P19827	911 aa		11.21	□□□□□ -0.62
SUPT5H-216	ENST00000599335	VAMP1	P23763	118 aa		11.21	□□□□□ -0.62
SUPT5H-216	ENST00000599335	CXCR3	P49682	368 aa		11.21	□□□□□ -0.62
SUPT5H-216	ENST00000599335	AIF1	P55008	147 aa		11.21	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms