RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 CD86P42081 329 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 RPL21P46778 160 aaKnown RBP10.37□□□□□ -0.75
SMG9-207ENST00000598860 RGRP47804 291 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 RPL26P61254 145 aaKnown RBP10.37□□□□□ -0.75
SMG9-207ENST00000598860 GUCY2DQ02846 1103 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 BCL2L1Q07817 233 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 NIPAL4Q0D2K0 466 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 KCNJ11Q14654 390 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 TERF2Q15554 542 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 MYLK3Q32MK0 819 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 PLK5Q496M5 336 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 ATXN7L2Q5T6C5 722 aaPredicted RBP10.37□□□□□ -0.75
SMG9-207ENST00000598860 RNASEH2BQ5TBB1 312 aaKnown RBP10.37□□□□□ -0.75
SMG9-207ENST00000598860 ARMC3Q5W041 872 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 KCTD11Q693B1 232 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 DPY19L3Q6ZPD9 716 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 PRUNE1Q86TP1 453 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 NLGN4XQ8N0W4 816 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 NDUFAF2Q8N183 169 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 MCUQ8NE86 351 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 OR2A12Q8NGT7 310 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 HCAR2Q8TDS4 363 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.37□□□□□ -0.75
SMG9-207ENST00000598860 CPT1BQ92523 772 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 FEM1CQ96JP0 617 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 ZNF641Q96N77 438 aaPredicted RBP10.37□□□□□ -0.75
SMG9-207ENST00000598860 RHOXF2Q9BQY4 288 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 TDRD1Q9BXT4 1180 aaKnown RBP10.37□□□□□ -0.75
SMG9-207ENST00000598860 TRIM31Q9BZY9 425 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 TSPYL1Q9H0U9 437 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 DPH5Q9H2P9 285 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 NOD2Q9HC29 1040 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 EPB41L5Q9HCM4 733 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 ZIM2Q9NZV7 527 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 MTRF1LQ9UGC7 380 aaKnown RBP10.37□□□□□ -0.75
SMG9-207ENST00000598860 IL36AQ9UHA7 158 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 EVLQ9UI08 416 aaPredicted RBP10.37□□□□□ -0.75
SMG9-207ENST00000598860 RPL26L1Q9UNX3 145 aaKnown RBP10.37□□□□□ -0.75
SMG9-207ENST00000598860 SNX24Q9Y343 169 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 B3GALT1Q9Y5Z6 326 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 VPS13AQ96RL7 3174 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 GON4LQ3T8J9 2241 aa10.37□□□□□ -0.75
SMG9-207ENST00000598860 THADAQ6YHU6 1953 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 A0A1W2PQF6 199 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 RNASEH1O60930 286 aaKnown RBP10.36□□□□□ -0.75
SMG9-207ENST00000598860 SUN1O94901 812 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 MT-CYBP00156 380 aaPredicted RBP10.36□□□□□ -0.75
SMG9-207ENST00000598860 FGF1P05230 155 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 MMP2P08253 660 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 GLI4P10075 376 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 MLNP12872 115 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 HLA-DPA1P20036 260 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 TGM1P22735 817 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 ITGA8P53708 1063 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 WNT3AP56704 352 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 PHC1P78364 1004 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 MLANAQ16655 118 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 INAVAQ3KP66 663 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 CFAP58Q5T655 872 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 C9orf64Q5T6V5 341 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 ARMC12Q5T9G4 340 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 FAXCQ5TGI0 409 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 FAM46CQ5VWP2 391 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 HIBCHQ6NVY1 386 aaPredicted RBP10.36□□□□□ -0.75
SMG9-207ENST00000598860 KDELC1Q6UW63 502 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 PRPF39Q86UA1 669 aaKnown RBP10.36□□□□□ -0.75
SMG9-207ENST00000598860 NAT8LQ8N9F0 302 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 TMIEQ8NEW7 156 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 IPMKQ8NFU5 416 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 MYRIPQ8NFW9 859 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 OR2T3Q8NH03 318 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 RLN3Q8WXF3 142 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 PRCCQ92733 491 aaPredicted RBP10.36□□□□□ -0.75
SMG9-207ENST00000598860 OXNAD1Q96HP4 312 aaPredicted RBP10.36□□□□□ -0.75
SMG9-207ENST00000598860 PPP1R16AQ96I34 528 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 RBM15Q96T37 977 aaKnown RBP eCLIP10.36□□□□□ -0.75
SMG9-207ENST00000598860 TBL1YQ9BQ87 522 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 GORASP1Q9BQQ3 440 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 MLPHQ9BV36 600 aaPredicted RBP10.36□□□□□ -0.75
SMG9-207ENST00000598860 ADGRE3Q9BY15 652 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 ZDHHC6Q9H6R6 413 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 XAB2Q9HCS7 855 aaKnown RBP10.36□□□□□ -0.75
SMG9-207ENST00000598860 PARD6AQ9NPB6 346 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 PRSS16Q9NQE7 514 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 GDF3Q9NR23 364 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 SEMA4GQ9NTN9 838 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 C14orf119Q9NWQ9 140 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 GRHL1Q9NZI5 618 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 DKK3Q9UBP4 350 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 ANAPC5Q9UJX4 755 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 SCML1Q9UN30 329 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 ATP23Q9Y6H3 246 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 CEP250Q9BV73 2442 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 PLXNA2O75051 1894 aa10.36□□□□□ -0.75
SMG9-207ENST00000598860 KRTAP9-6A0A140TA67 174 aa10.35□□□□□ -0.75
SMG9-207ENST00000598860 LOC285095A0A1B0GVY8 99 aa10.35□□□□□ -0.75
SMG9-207ENST00000598860 TSPAN11A1L157 253 aa10.35□□□□□ -0.75
SMG9-207ENST00000598860 PRR5-ARHGAP8B1AHC4 643 aa10.35□□□□□ -0.75
SMG9-207ENST00000598860 HTRA2O43464 458 aaPredicted RBP10.35□□□□□ -0.75
SMG9-207ENST00000598860 FOXD2O60548 495 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms