RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 CHRNA6Q15825 494 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 LACTB2Q53H82 288 aaPredicted RBP11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 AGAP9Q5VTM2 703 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 MICALCLQ6ZW33 695 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 ZC3H18Q86VM9 953 aaKnown RBP11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 VSIG1Q86XK7 387 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 RHOT1Q8IXI2 618 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 ZNF567Q8N184 647 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 BEND7Q8N7W2 519 aaPredicted RBP11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 IPMKQ8NFU5 416 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 BLOC1S5Q8TDH9 187 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 CT55Q8WUE5 264 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 KLHL6Q8WZ60 621 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 AKIRIN1Q9H9L7 192 aaPredicted RBP11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 NHEJ1Q9H9Q4 299 aaPredicted RBP11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 IL26Q9NPH9 171 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 FAM8A1Q9UBU6 413 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 ANAPC2Q9UJX6 822 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 TFR2Q9UP52 801 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 PLAAQ9Y263 795 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 CFAP20Q9Y6A4 193 aaKnown RBP11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 LOC285095A0A1B0GVY8 99 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 CDC14CA4D256 554 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 TOX3O15405 576 aaPredicted RBP11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 SPOPO43791 374 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 DNAJB5O75953 348 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 EBLN1P0CF75 366 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 FGF5P12034 268 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 FOLR1P15328 257 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 ZFXP17010 805 aaPredicted RBP11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 HMGCLP35914 325 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 SPAM1P38567 509 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 ARHGAP25P42331 645 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 RPS18P62269 152 aaKnown RBP11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 MC1RQ01726 317 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 OLIG2Q13516 323 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 DNASE1L3Q13609 305 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 TAZQ16635 292 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 ODF2Q5BJF6 829 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 GPRC6AQ5T6X5 926 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 WASH2PQ6VEQ5 465 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 SPOCD1Q6ZMY3 1216 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 DET1Q7L5Y6 550 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 GLT6D1Q7Z4J2 308 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 RHOT2Q8IXI1 618 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 TFB1MQ8WVM0 346 aaKnown RBP11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 MAP3K3Q99759 626 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 GORASP1Q9BQQ3 440 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 C10orf88Q9H8K7 445 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 WASH6PQ9NQA3 447 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 DDX56Q9NY93 547 aaKnown RBP11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 IL17CQ9P0M4 197 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 KLHL8Q9P2G9 620 aaPredicted RBP11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 FAM153AQ9UHL3 310 aa11.85□□□□□ -0.51
SOX2-OT-228ENST00000597828 GLYATL1P3A0A0U1RQE8 302 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 GOLGA6L3A6NEY3 463 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 DDX3YO15523 660 aaKnown RBP11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 MTSS1O43312 755 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 POP7O75817 140 aaKnown RBP11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 PDGFAP04085 211 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 NELFEP18615 380 aaKnown RBP11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 FECHP22830 423 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 HALP42357 657 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 ARCN1P48444 511 aaKnown RBP11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 DMPKQ09013 629 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 TUBB3Q13509 450 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 SEPT6Q14141 434 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 TRIM14Q14142 442 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 IL11RAQ14626 422 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 PLCL1Q15111 1095 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 SLC1A5Q15758 541 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 RPE65Q16518 533 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 PPP2R5EQ16537 467 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 CRTC2Q53ET0 693 aaPredicted RBP11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 LRRC38Q5VT99 294 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 CCDC70Q6NSX1 233 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 PWWP2BQ6NUJ5 590 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 FAM199XQ6PEV8 388 aaPredicted RBP11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 FBXO38Q6PIJ6 1188 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 TMEM220Q6QAJ8 160 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 AMZ2Q86W34 360 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 PPP1R3BQ86XI6 285 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 VSTM4Q8IW00 320 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 RNF214Q8ND24 703 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 DDHD1Q8NEL9 900 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 CCDC42Q96M95 316 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 PPM1MQ96MI6 270 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 TTC25Q96NG3 672 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 TRIM55Q9BYV6 548 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 LHX9Q9NQ69 397 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 IMP3Q9NV31 184 aaKnown RBP11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 ZNHIT6Q9NWK9 470 aaKnown RBP11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 ANKMY1Q9P2S6 941 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 EPHA6Q9UF33 1036 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 POLHQ9Y253 713 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 KCTD3Q9Y597 815 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 PCDHB3Q9Y5E6 796 aa11.84□□□□□ -0.51
SOX2-OT-228ENST00000597828 hCG_1818297A0A087WSY0 165 aa11.83□□□□□ -0.52
SOX2-OT-228ENST00000597828 CREG1O75629 220 aa11.83□□□□□ -0.52
SOX2-OT-228ENST00000597828 NTRK1P04629 796 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms